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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5iw7D_

Fold library idPDB HeaderMoleculeTitle
c5iw7D_3.60PDB header: translationChain: D: PDB Molecule: ribosome biogenesis protein tsr1,ribosome biogenesis


Added to library: Sat Jun 18 08:25:11 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GAAKIITIVPLVNDLDPLDILYKLLKCARIFNVHIKKSNLKIIIPDMTNFLNILDCAKVADFVVFGVDEE
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Known secondary structure (DSSP)




SSS

T







TT
S
S


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FGEQIIRALELQGIASYIGVISNLSAFQLDVKQSLESYFKHFFPSEERSDALNVLRTLCQRLPRSINWRD
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Known secondary structure (DSSP) T





S
TT


TT



S




 .........150.........160.........170.........180.........190.........200.........210
Sequence NRGYVVADFVDFVETSPDSGDLVIEGTVRGIGFNANRLVHIPDFGDFQLNKIEVFESNMNRDTLDEYAPE
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Known secondary structure (DSSP)

S

SSS

B
SS
B
SSS
TTT




TT




SS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GTEDWSDYDEDFTTARYDDHGFLPGPDEIELEPSESAIERLKRYRGLKNLYNCDWQVDEKDPSSPAEWKR
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Known secondary structure (DSSP) TGGGG













SS






SSS
TSS
BS
TTT



SS


TTS
TTGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLRIGNYKNTKNRIIKETKNEAQAIAGDRIRMFIRFPKFLLEKIQDPKQLLFAVYGLLLHEHKNAVVNFS
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Known secondary structure (DSSP) S


S
T
SB
TT


GGGGGG


TTTS



TTSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LQRWEQYDKPVPSQEPIVVQYGVRRYTIQPLFSQGSNSPNNVHKYERFLHPDTVSVATCIAPVDFTQSPA
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Known secondary structure (DSSP)
TT





SSS
TT






TT
SS

SSS


SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence IFFKLIGHGTFLNADHSRILAKRAILTGHPVVTVRYMFFRPEDVEWFKSIPLFTKSGRSGFIKESLGTHG
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Known secondary structure (DSSP)




S






SS


TTTS
TTS


SSS
 .........500.........510.......
Sequence YFKATSAQDVVAMSLYKRMWPMPSLPW
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Known secondary structure (DSSP)



S




B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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