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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ivwV_

Fold library idPDB HeaderMoleculeTitle
c5ivwV_10.00PDB header: transcription/dnaChain: V: PDB Molecule: tfiih basal transcription factor complex helicase xpb


Added to library: Sat May 21 09:38:15 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPT
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Known secondary structure (DSSP)

TT


TTTT



SSS

SSSSSSGGGGG
TT




TT











 .........80.........90.........100.........110.........120.........130.........140
Sequence AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWST
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Known secondary structure (DSSP)




GGG



TTSS
S
S
GGGTST
 .........150.........160.........170.........180.........190.........200.........210
Sequence IDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRR
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Known secondary structure (DSSP) TTTTS
BSSS
B
SSSSS


SSTTSSSTTTTTTS

SSSS
S

SGGGTTSTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYV
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Known secondary structure (DSSP) TS

SSS
S
TT

T





GGGS
TTTS




TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence AIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQIL
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Known secondary structure (DSSP)

STT
TT


SST


TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLV
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Known secondary structure (DSSP)
TT


GGGSSS




BSSS

SS
B


SS
TTSS
S
 .........430.........440.........450.........460.........470.....
Sequence SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLA
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Known secondary structure (DSSP) TTSGGGGGTT




TTGGGS

S

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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