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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5isuA_

Fold library idPDB HeaderMoleculeTitle
c5isuA_2.20PDB header: transport proteinChain: A: PDB Molecule: lmo0135 protein;


Added to library: Sat Mar 26 09:15:08 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KDGGSLIIGVTGDPEVINPNYASDRVTLTIQQAVYAPLFWEVDGKPALAKSLDISDDNLTYTVKLKDGLT
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Known secondary structure (DSSP)



SS





TTT

S


SB
TTT

BSS
TTS

TT
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence WHDGKPLTADDVVFTVNSILDTKQNSPNRGNFVFDDKPVKVEAVDDTTVKFTLPTVAPAFENTIKTFFPI
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Known secondary structure (DSSP)
TTS
B


GGG

TTGGGGTT
TT
SS

TTTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence PKHIFEGVENIEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLAL
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Known secondary structure (DSSP)
TT
S
TTT
GGGGS


SSSTTT
TT
TT


SSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence QNGEINLKSIQPSDRNKVEKASAVNIITYPENRLSYATFNENQPALKSKELRQALSYALDREEIIDAAYG
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Known secondary structure (DSSP) TTS



GGGSS
TTSGGGG
T

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SDEYAKPASSFLTENTKYFTDKVETYDQDIAKAKKLVKESGFDTSQKLTVYYLNNSKSQESIALYLQQQY
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Known secondary structure (DSSP) STTS

SSS
TTSTT

S
S





T

TTSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KEIGVTLDLKPTDPNALSNITLDRKNADYSIALNGYIMGNDPDAYKSLYLSDAPYNYSNYHNKDLDALWE
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Known secondary structure (DSSP) TTT

T
TT

S
S


SSGGGGGGGTSTT
TT
TT



 .........430.........440.........450.........460.........470.........480........
Sequence KGAVTADDKERQEIYEKIQNTIADDAVIYPISYDNAVLALDSRYGGQKAATPQPVTMFRDLSKLYLTE
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Known secondary structure (DSSP)


TT
TT

TTTS
GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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