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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5is0E_

Fold library idPDB HeaderMoleculeTitle
c5is0E_3.43PDB header: transport proteinChain: E: PDB Molecule: transient receptor potential cation channel subfamily v


Added to library: Sat May 28 08:30:10 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TPLALAASSGKIGVLAYILQREIHEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSS
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Known secondary structure (DSSP)
T
TT



STTTTTT
S

SS





STTTSTT
T

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ETPNRHDMLLVEPLNRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTAAAYYRPVEGLPPYKLKNTVGDYFR
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Known secondary structure (DSSP)
SS
TTTGGGSTT


SSSSS



SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VTGEILSVSGGVYFFFRGIQYFLQRRPSLKSLFVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFS
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Known secondary structure (DSSP)

TTTSSTTTTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKYNSLYSTCLEL
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Known secondary structure (DSSP) GGGGGGTT
TTTTTB
SSGGGST
 .........290.........300.........310.........320.........330.........340.........350
Sequence FKFTIGMGDLEFTENYDFKAVFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILD
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Known secondary structure (DSSP) TT


SSS


BS
TTT
 .........360.........370.........380.........390....
Sequence TEKSFLKCMRKAFRSGKLLQVGFTPDGKDDYRWCFRVDEVNWTT
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Known secondary structure (DSSP) TTSS
TTSS
S

S
S



SSS

SS
S









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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