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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ir6A_

Fold library idPDB HeaderMoleculeTitle
c5ir6A_3.80PDB header: oxidoreductaseChain: A: PDB Molecule: bd-type quinol oxidase subunit i;


Added to library: Sat May 7 09:17:00 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNGYDPVLLSRILTELTLTVHIIYATIGVGVPLMIAIAQWVGIRKNDMHYILLARRWTRGFVITVAVGVV
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Known secondary structure (DSSP)
TTTTTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TGTAIGLQLSLLWPNFMQLAGQVISLPLFMETFAFFFEAIFLGIYLYTWDRFENQKKHLLLLIPVAIGSS
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Known secondary structure (DSSP)
TTTSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ASAMFITMVNAFMNTPQGFELKNGELVNIDPIVAMFNPAMPTKVAHVLATSYMTSAFVLASIAAWHLWKG
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Known secondary structure (DSSP) S

S
TT


T
SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NRHIYHRKALHLTMKTAFIFSVASALVGDLSGKFLAEYQPEKLAAAEWHFETSSHAPLILFGTLEEDNEV
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Known secondary structure (DSSP)


TT

S
BSS


SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KYALEIPYALSILAHNHPAAVVTGLNDIPEDERPPLYIHYLFDVMVTIGVFLMVVAAVYWLGSIFRWKWT
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Known secondary structure (DSSP)


TTTTSSS
TT

B

STTS
TTT


STTTTS

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence AKNWFFGLLVAGGPLAMIAIEAGWYLAEVGRQPWILRGYMKTAEGATTSAHVDTMLVLFCLLYIVLVIAS
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Known secondary structure (DSSP) T
TTTTTT

GGGT


STT
 .........430..
Sequence ATVLIRMFRRNP
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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