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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ipxA_

Fold library idPDB HeaderMoleculeTitle
c5ipxA_2.40PDB header: viral proteinChain: A: PDB Molecule: orf49 protein;


Added to library: Thu Feb 9 13:01:35 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HLFNHLFRYHYPSWDQILQELDTLSVATLNPDCHVPALNVEKTLYLAKTIQILVQHRQSEPYLVPAARAN
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Known secondary structure (DSSP)
TT

TT




SSGGGGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LAYSLQQLYKLGNDKIRGVINGMLPLVDAGCIGFERELIKGLPRVLTLQYPHTAPCTEWCLSHFVGASGR
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Known secondary structure (DSSP) T

T
TTSTTT


TT

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence LRSEVRDILTTHNGTCAPSFEWMASVVKKFFLVETVIYEDFQDTDFNVQLNLCFFWTAVVQMYQRCIYEQ
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Known secondary structure (DSSP)

TTTT

S
TT


SS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLVHIISTSLTLLKSTARSFFAWYDLYRPNLGSAALVKYTEHLIRALTPDCSDVELGELCSHLHHCKHAL
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Known secondary structure (DSSP)


SS
T

TT

 ..
Sequence FS
Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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