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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5injA_

Fold library idPDB HeaderMoleculeTitle
c5injA_1.40PDB header: transferaseChain: A: PDB Molecule: prenyltransferase;


Added to library: Sat May 21 08:45:23 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALLGDLATGQLTRLCEVAGLTEADTAAYTGVLIESLGTSAGRPLSLPPPSRTFLSDDHTPVEFSLAFLPG
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Known secondary structure (DSSP)
BTT

GGGGG
BTTS

SS

SSSTT

S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RAPHLRVLVEPGCSSGDDLAENGRAGLRAVHTMADRWGFSTEQLDRLEDLFFPSSPEGPLALWCALELRS
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Known secondary structure (DSSP) S


TTGGGTT
T


S
SS

SS
S


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGVPGVKVYLNPAANGADRAAETVREALARLGHLQAFDALPRADGFPFLALDLGDWDAPRVKIYLKHLGM
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Known secondary structure (DSSP) TS


TTTT
GGGTT
TTS


SSS
SS

TTB
 .........220.........230.........240.........250.........260.........270.........280
Sequence SAADAGSLPRMSPAPSREQLEEFFRTAGDLPATGRLAGRPALTCHSFTETATGRPSGYTLHVPVRDYVRH
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Known secondary structure (DSSP)



SSS


T





B
SS


SSS
S
S
GGGSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DGEARDRAVAVLREHDMDSAALDRALAAVSPRPLSDGVGLIAYLALVHQRGRPTRVTVYVSSEAYEVRPP
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Known secondary structure (DSSP) TT



S
GGG
B
STTS



SS

B

 ......
Sequence RETVPW
Predicted secondary structure





SS confidence





Known secondary structure (DSSP)
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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