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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ineA_

Fold library idPDB HeaderMoleculeTitle
c5ineA_3.50PDB header: viral proteinChain: A: PDB Molecule: pre-glycoprotein polyprotein gp complex;


Added to library: Sat Apr 23 08:17:00 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NGPDIYKGVYQFKSVEFDMSHLNLTMPNACSANNSHHYISMGSSGLELTFTNDSILNHNFCNLTSAFNKK
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Known secondary structure (DSSP)

SSTTTB
GGGGSSSS

SSSTTSS
S

S




ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence TFDHTLMSIVSSLHLSIRGNSNHKAVSCDFNNGITIQYNLSFSQCRTFRGRVLDMFRTAFGGKYMRSGWG
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Known secondary structure (DSSP) T

TS
S


TTT
TTS






SS
TTSS



T
 .........150.........160.........170.........180.........190.........200.........210
Sequence WATTWCSQTSYQYLIIQNRTWENHCRYAGPFGMSRILFAQEKTKFLTTFTWTLSDSSGVENPGGYCLTKW
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Known secondary structure (DSSP) T


SS


S
S


S

S



TTSS







SSSSS
S
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence MILAAELKCFGNTAVAKCNVNHDEEFCDMLRLIDYNKAALSKFKQDVESALHVFKTTVNSLISDQLLMRN
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Known secondary structure (DSSP) TBSSSS

T

S

SS
SS
 .........290.........300.........310.........320.........330.........340........
Sequence HLRDLMGVPYCNYSKFWYLEHAKTGETSVPKCWLVTNGSYLNETHFSDQIEQEADNMITEMLRKDYIK
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Known secondary structure (DSSP) TS
B

SSTTT

B




B
SSSB

TTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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