Fold library entry viewer: c5im3A_

Added to library: Sat May 7 09:16:51 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	R	V	I	K	R	N	G	T	V	V	P	Y	T	D	D	K	I	T	V	A	I	T	K	A	F	L	A	V	E	G	G	T	A	A	A	S	S	R	I	H	D	T	V	R	R	L	T	E	Q	V	T	A	T	F	K	R	R	M	P	S	G	G	T	I	H	I	E	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S																						S		S	T	T	S	S																						T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	D	Q	V	E	L	A	L	M	R	A	G	E	Q	K	V	A	R	D	Y	V	I	Y	R	E	A	R	A	A	E	R	K	N	A	G	A	A	S	D	V	A	Q	P	H	P	S	I	R	I	T	R	A	D	G	S	L	S	P	L	D	M	G	R	L	N	T	I	I	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																										T														T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	C	E	G	L	A	E	V	D	G	A	L	I	E	R	E	T	L	K	N	L	Y	D	G	V	A	E	K	D	V	N	T	A	L	V	M	T	A	R	T	L	V	E	R	E	P	N	Y	S	Y	V	T	A	R	L	L	M	D	T	L	R	A	E	A	L	G	F	L	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		S	S													T			T	T		B														T	T	T	T	T		T	T																						T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	E	S	A	T	H	H	E	M	A	E	L	Y	A	K	A	L	P	A	Y	I	E	K	G	A	E	F	E	L	V	D	A	K	L	K	E	F	D	L	E	K	L	G	K	A	I	D	H	E	R	D	Q	Q	F	T	Y	L	G	L	Q	T	L	Y	D	R	Y	F	I	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S				S	T	T																			T	T	S	S		G	G	G	G	G	S											G	G	G	G	G	G													T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	G	I	R	F	E	L	P	Q	I	F	F	M	R	V	A	M	G	L	A	I	E	E	K	D	R	E	A	R	A	I	E	F	Y	N	L	L	S	S	F	D	Y	M	S	S	T	P	T	L	F	N	A	G	T	L	R	P	Q	L	S	S	C	Y	L	T	T	V	P	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																		T	T	T		S	S														T	T	S											T	T	S	S	S													S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	S	G	I	Y	G	A	I	H	D	N	A	M	L	S	K	F	A	G	G	L	G	N	D	W	T	P	V	R	A	L	G	S	Y	I	K	G	T	N	G	K	S	Q	G	V	V	P	F	L	K	V	V	N	D	T	A	V	A	V	N	A	V	C	A	Y	L	E	T	W	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	S								T	T	S			T	T				T	T	T	T						S																							T	T	B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	D	I	E	E	F	L	E	L	R	K	N	T	G	D	D	R	R	R	T	H	D	M	N	T	A	N	W	I	P	D	L	F	M	K	R	V	F	D	D	G	S	W	T	L	F	S	P	S	D	V	P	D	L	H	D	L	Y	G	K	A	F	E	E	R	Y	E	Y	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						T	T	T		S	S	S		G	G	G			T	T	S																T	T								T	T	T	S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	L	A	S	Y	G	K	L	K	L	H	K	V	V	Q	A	K	D	L	W	R	K	M	L	S	M	L	F	E	T	G	H	P	W	L	T	F	K	D	P	C	N	L	R	S	P	Q	Q	H	V	G	V	V	H	S	S	N	L	C	T	E	I	T	L	N	T	N	K	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S		S																							S											T		T	T	T	T	T								T	T	S							B	T	T	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	A	V	C	N	L	G	S	I	N	L	V	N	H	I	V	D	G	K	L	D	T	A	K	L	E	K	T	V	K	T	A	V	R	M	L	D	N	V	I	D	I	N	Y	Y	S	V	P	Q	A	Q	N	S	N	F	K	H	R	P	V	G	L	G	I	M	G	F	Q	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G	G	B		S	S	S	B																										S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	Y	L	Q	H	I	P	Y	G	S	D	A	A	I	A	F	A	D	Q	S	M	E	A	I	S	Y	Y	A	I	Q	A	S	C	D	L	A	D	E	R	G	A	Y	Q	T	F	Q	G	S	L	W	S	Q	G	I	L	P	I	D	S	E	K	K	L	I	E	E	R	G	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T			S	S	S																																	G	G	G	T	T	S	T	T	T	T	T																T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Y	I	E	V	D	L	S	E	T	L	D	W	A	P	L	R	E	R	V	Q	K	G	I	R	N	S	N	I	M	A	I	A	P	T	A	T	I	A	N	I	T	G	V	S	Q	S	I	E	P	T	Y	Q	N	L	Y	V	K	S	N	L	S	G	E	F	T	V	I	N	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									S										T	T			S		S			B		B											T				T	T				S		S						S	S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	V	R	D	L	K	A	R	G	L	W	D	P	V	M	V	N	D	L	K	Y	Y	D	G	S	V	Q	Q	I	E	R	I	P	Q	D	L	K	D	L	Y	A	T	A	F	E	V	E	T	R	W	I	V	E	A	A	S	R	R	Q	K	W	I	D	Q	A	Q	S	L	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			S										T	T	T			T	T		T	T	S								T			G	G	G	S													T	T	T		S	S		B
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.
Sequence	Y	I	A	G	A	S	G	K	K	L	D	V	T	Y	R	M	A	W	F	R	G	L	K	T	T	Y	Y	L	R	A	L	A	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																T	T			B								S

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PDB structure

FASTA sequence

Hidden Markov model

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