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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5im2A_

Fold library idPDB HeaderMoleculeTitle
c5im2A_1.70PDB header: transport proteinChain: A: PDB Molecule: twin-arginine translocation pathway signal;


Added to library: Sat Mar 26 08:31:55 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TVTLKFHTFMAPQSNVWQNMHKVWMDKVSKESGGRIQFEAYPAMQLGGSPAQLYDQAKDGVVDIIWTIPG
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Known secondary structure (DSSP)
SS
TTSTTTTS
TTTTSS
GGGTSSS
GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence YTAGRFPRIEVFELPFMMTNAEATSRACWEYMQTMALDEFKDTQVLALQVHGPGVFHTKDKQIKTAADLK
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Known secondary structure (DSSP) GSTTTSTGGGGGGSTT

S

GGGGTTS
S
SS


SSGGGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLKMRGPTRQVTKMLGYLGAIPVGMPLPAIPDALSKGTIDGAALPWEVVPSVKVHELTRFHSEFDPAGGA
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Known secondary structure (DSSP) T
SST


GGGTS
SGGGGGGGT


GGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence LYTATFVLAMNKASYQALPPDLRKIIDNNSGLQTSGWLGRVQQAGDAAGRQAALAHKNTIYAIPALEAQE
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Known secondary structure (DSSP) S



TS
TSSTTT

 .........290.........300.........310.........320..
Sequence FKRKAAVVEVAWVEDMNQRGFDGRQLLTTARALIAKHSKVAA
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Known secondary structure (DSSP) TTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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