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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5il7B_

Fold library idPDB HeaderMoleculeTitle
c5il7B_2.30PDB header: signaling proteinChain: B: PDB Molecule: rab family protein;


Added to library: Sat Mar 19 08:42:42 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDLDVIRQIEQELGMQLEPVDKLKWYSKGYKLDKDQRVTAIGLYDCGSDTLDRIIQPLESLKSLSELSLS
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Known secondary structure (DSSP)
T



SS

TT

TTS
TT

TT
TT


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence SNQITDISPLASLNSLSMLWLDRNQITDIAPLASLNSLSMLWLFGNKISDIAPLESLKSLTELQLSSNQI
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Known secondary structure (DSSP) TS

S

GGGGG

S


TTS




GGGGG
TT



SS




GGGGG
TT
S

SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence TDIAPLASLKSLTELSLSGNNISDIAPLESLKSLTELSLSSNQITDIAPLASLKSLTELSLSSNQISDIA
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Known secondary structure (DSSP)


GGGGG
TT
S

SS




GGGGG
TT



SS




GGGGG
TT



SS




G
 .........220.........230.........240.........250.........260.........270.........280
Sequence PLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELQLSRNQISDIAPLES
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Known secondary structure (DSSP) GGTT
TT



SS




GGGTT
TT



SS




GGGGG
TT



SS




GGGTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LNSLSKLWLNGNQITDIAPLASLNSLTELELSSNQITDIAPLASLKSLSTLWLSSNQISDIAPLASLESL
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Known secondary structure (DSSP)
TT



SS




GGGTT
TT



SS




GGGTT
TT



SS




GGGGG
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SELSLSSNQISDISPLASLNSLTGFDVRRNPIKRLPETITGFDMEILWNDFSSSGFITFFDNPLESPPPE
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Known secondary structure (DSSP)


SS




GGGTT
TT



SS





GGGGSSS

SS

TT
S



SS
 .........430.........440
Sequence IVKQGKEAVRQYFQSIEEAR
Predicted secondary structure

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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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