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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5iklD_

Fold library idPDB HeaderMoleculeTitle
c5iklD_2.40PDB header: ligaseChain: D: PDB Molecule: geranyl-coa carboxylase, beta-subunit;


Added to library: Sat Apr 16 09:11:21 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PAIQSELDVNGEDFARNREAMLAAVAGFRELEQKVLDKAAEARPKFEKRGQLLPRERLALLLDPGAPFLE
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Known secondary structure (DSSP)
B



S
TT
STTT


S
TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence LSSLAGYKLHAGGGIIAGIGYIAGVRCLVSASNSAIKGGTISPTGLKKTLRLQQIAMENKLPVVTLTESG
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Known secondary structure (DSSP)
TTTTTT



TTTT
TTSTTS
B
T



B
 .........150.........160.........170.........180.........190.........200.........210
Sequence GANLNYAAEIFVEGARGFANQARISAMGIPQVTVVHGSSTAGGAYQPGLSDYVVVVRGKAKMFLAGPPGE
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Known secondary structure (DSSP) SB
TTTT


SBB
GGGGTSSSSS
B

SS




 .........220.........230.........240.........250.........260.........270.........280
Sequence IASDEELGGAELHAQVAGTAEYLAENDADGVRLAREIVGMLPWNAQLPARSWREPLYPVEELLGVVPADP
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Known secondary structure (DSSP)


BTT


SSSS

GGGS







SS
GGGGGGSS
SST
 .........290.........300.........310.........320.........330.........340.........350
Sequence KKPYDVREIVARIADGSEFLDFKNEFDGQTVCGHLRIEGHACGLIGNNGPITPQGAAKAAQFIQLCEQSN
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Known secondary structure (DSSP) TS


TSGGGB
STTT
SSTTSS
B
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TPLLFLHNTTGFMVGTESERQGVIKHGSKMIQAVANARVPKLTLVVGGSYGAGNYAMCGRGLDPRFIFAW
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Known secondary structure (DSSP)



B

STT

S
TTT
GGG

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence PNSRTAVMGGAQAGKVLRIVTEEKPKMLEMLETVTAQKLDSQSTALYGTASLWDDGLVDPRDSRRLLGYL
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Known secondary structure (DSSP) TT
SS
T


STTTTBTTSSS
B

GGG
 .........500.........510..
Sequence LDICAEAEARPLKGNSFGVARF
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Known secondary structure (DSSP)





SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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