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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5igrA_

Fold library idPDB HeaderMoleculeTitle
c5igrA_1.60PDB header: transferase/antibioticChain: A: PDB Molecule: macrolide 2'-phosphotransferase;


Added to library: Sat Apr 29 08:20:05 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TVVTTADTSQLYALAARHGLKLHGPLTVNELGLDYRIVIATVDDGRRWVLRIPRRAEVSAKVEPEARVLA
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Known secondary structure (DSSP)



SS
TTT




SSTTS

STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence MLKNRLPFAVPDWRVANAELVAYPMLEDSTAMVIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISA
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Known secondary structure (DSSP) GGGSSSB



SSSS



SS

TT
SS
S

TT
TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVDAGMLIRTPTQARQKVADDVDRVRREFVVNDKRLHRWQRWLDDDSSWPDFSVVVHGDLYVGHVLIDNT
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Known secondary structure (DSSP) TT

B

S



GGGS
S


SS
SGGG
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ERVSGMIDWSEARVDDPAIDMAAHLMVFGEEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFA
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Known secondary structure (DSSP) S



TT

GGGGTTT



TT
 .........290.........300
Sequence LDSGNEEYLAAAKAQLAAAE
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Known secondary structure (DSSP) T
S


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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