Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ig8A_

Fold library idPDB HeaderMoleculeTitle
c5ig8A_2.28PDB header: ligaseChain: A: PDB Molecule: atp grasp ligase;


Added to library: Thu Feb 9 14:38:46 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PKVVLLLTHSGDFFTIDRVAEAIEKKGATPFRLDTDKFPLEVQLTAQFNGKKSFYQLSYNHQSIDSEQVQ
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)


TT

T

GGGTTTT

SSS


TTGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence SVWTRRIWQPELTGDLDPQFREVCVRESQTTLAGFWDSLRSARWLDNLAQIEKAKNKLLQLRLASEVGLI
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) S







S


TTTSS
T
TT
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence IPPTLVTNNPDAAREFFSQVQGRMVSKLLTAIARSMESPEFFLYTSRVKAEDLEEAESLRYCPMVFQAEI
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)


S
SSTT



SSSS





S

GGGTT



 .........220.........230.........240.........250.........260.........270.........280
Sequence PKQLELRVVVVNGQTFVGALESSQGAWQHHTLPDSLLQQLQIFMANLGLNFGAFDFILTPGGEYVFLEVN
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)

STT





B




TT
S
TT


 .........290.........300.......
Sequence PGGEWGMLERDLDLPISQAIADFLVFG
Predicted secondary structure








SS confidence


























Known secondary structure (DSSP) TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D