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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5idvA_

Fold library idPDB HeaderMoleculeTitle
c5idvA_1.45PDB header: transport proteinChain: A: PDB Molecule: lipid a export atp-binding/permease protein msba;


Added to library: Sat Mar 5 10:08:58 2016
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence FELLDLPEEQNSGELKPQLQGAIRFDHVVLNYADGTQAIKDFSLDIRPGETVALVGRSGAGKTSLVNMLV
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Known secondary structure (DSSP)













B




S

TTS

TT
S
GGGST
 .........80.........90.........100.........110.........120.........130.........140
Sequence RFQEVSSGQIYLDDLPIRDIELSSLRTQIAMVNQQVVLFNRTVRENIAYGQLHNASDEDVIAAAKAAYAH
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Known secondary structure (DSSP) TSS

STTGGGB
TSTT



SSBS
GGGTT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DFIMNLPNGYDTVLGAQGLNLSGGQRQRIAIARAILKNAPILILDEATSALDNESEHFIQQAFDEAMQDR
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Known secondary structure (DSSP) TSTTGGG
BTTSTT





S


TT

TTS
 .........220.........230.........240.........250.........260...
Sequence TTIVIAHRLSTIENADRIVVMDRGQIVEQGTHQELLAKHGAYYQLHQRNFEDH
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Known secondary structure (DSSP)

ST
STT
TSTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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