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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5iduB_

Fold library idPDB HeaderMoleculeTitle
c5iduB_1.95PDB header: oxidoreductaseChain: B: PDB Molecule: acyl-coa dehydrogenase domain protein;


Added to library: Sat Mar 12 09:16:06 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IDPHGALAWPFFEARHRELAAGIEAWATQHLACVQHDDTDTTCRKLVRALGEAGWLKYGVGGAQYGGHGD
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Known secondary structure (DSSP)

TTSGGGSTT


SS


SSTTGGGGGS

GGGT
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TIDTRAVCLLRETLANHDGLADFALAMQGLGSGAITLAGTHEQKIRYLPRVSKGEAIAAFALSEPDAGSD
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Known secondary structure (DSSP) S




TTSS




BTTBSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VAAMSLQARAEGDCYVIDGDKTWISNGGIADFYVVFARTGEAPGARGISAFIVDADTPGLQIAERIDVIA
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Known secondary structure (DSSP) GGG


TTTTTT
S

SSSGGGSTT
TT


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PHPLARLHFDSARVPRSQMLGAPGEGFKIAMRTLDVFRTSVAAASLGFARRALQEGLARAASRKMFGQTL
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Known secondary structure (DSSP)


GGGSSTT

TTG
 .........290.........300.........310.........320.........330.........340.........350
Sequence GDFQLTQTKLAQMALTIDSSALLVYRAAWLRDQGENVTREAAMAKWHASEGAQQVIDAAVQLWGGMGVQS
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Known secondary structure (DSSP) GGSTT


TGGGGGST
 .........360.........370.........380.........
Sequence GTTVERLYREIRALRIYEGATEVQQLIVGRDLLKAHAAQ
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Known secondary structure (DSSP) TSTGGGGTSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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