Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5id6A_

Fold library idPDB HeaderMoleculeTitle
c5id6A_2.38PDB header: hydrolaseChain: A: PDB Molecule: cpf1;


Added to library: Sat Apr 30 08:31:35 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AASKLEKFTNCYSLSKTLRFKAIPVGKTQENIDNKRLLVEDEKRAEDYKGVKKLLDRYYLSFINDVLHSI
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)


SGGG
SS
S

TTTTGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence KLKNLNNYISLFRKKTRTEKENKELENLEINLRKEIAKAFKGAAGYKSLFKKDIIETILPEAAKDEIALV
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP)

STTT


TTSS

STTSSTT


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NSFNGFTTAFTGFFDNRENXFSEEAKSTSIAFRCINENLTRYISNXDIFEKVDAIFDKHEVQEIKEKILN
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) TT
TT
GGGGGGGS


STT
TTGGGS
T




T
 .........220.........230.........240.........250.........260.........270.........280
Sequence SDYDVEDFFEGEFFNFVLTQEGIDVYNAIIGGFVTESGEKIKGLNEYINLYNAKTKQALPKFKPLYKQVE
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) SSS
TGGGGSGGGGGGGSS

SSTT

GGGGSS














 .........290.........300.........310.........320.........330.........340.........350
Sequence GYTSDEEVLEVFRNTLNKNSEIFSSIKKLEKLFKNFDEYSSAGIFVKNGPAISTISKDIFGEWNLIRDKW
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)

S
STTSTGGGS
GGG
SSTS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence NAEYDDIHLKKKAVVTEKYEDDRRKSFKKIGSFSLEQLQEYADADLSVVEKLKEIIIQKVDEIYKVYGSS
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP)

TT







TT

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence EKLFDADFVLEKSLKKNDAVVAIXKDLLDSVKSFENYIKAFFGEGKETNRDESFYGDFVLAYDILLKVDH
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) GGGG
TT



S
GGG
TTS





SS

TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence IYDAIRNYVTQKPYSKDKFKLYFQNPQFXGGWDKDKETDYRATILRYGSKYYLAIXDKKYAKCLQKIDKD
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) S
SS




SS
TTTTS

SSS

TT
GGGGGGGTS



 .........570.........580.........590.........600.........610.........620.........630
Sequence DVNGNYEKINYKLLPGPNKXLPKVFFSKKWXAYYNPSEDIQKIYKNGTFKKGDXFNLNDCHKLIDFFKDS
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
SS



B


TSSSS


TTTSSSS


 .........640.........650.........660.........670.........680.........690.........700
Sequence ISRYPKWSNAYDFNFSETEKYKDIAGFYREVEEQGYKVSFESASKKEVDKLVEEGKLYXFQIYNKDFSDK
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) T
TT






GGG

SSB


TTS
GGGSTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence SHGTPNLHTXYFKLLFDENNHGQIRLSGGAELFXRRASLKKEELVVHPANSPIANKNPDNPKKTTTLSYD
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)

S


TT
TT
SSS
S




S
GGGS

TTS



TT
S



SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence VYKDKRFSEDQYELHIPIAINKCPKNIFKINTEVRVLLKHDDNPYVIGIDRGERNLLYIVVVDGKGNIVE
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TTGGGGS
SSS
S

S
T
SS


SS
S
TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence QYSLNEIINNFNGIRIKTDYHSLLDKKEKERFEARQNWTSIENIKELKAGYISQVVHKICELVEKYDAVI
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)
STTTTT
T
 .........920.........930.........940.........950.........960.........970.........980
Sequence ALEDLNSGFKNSRVKVEKQVYQKFEKXLIDKLNYXVDKKSNPCATGGALKGYQITNKFESFKSXSTQNGF
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)
STT



TT
SS
SB

TTS
TTSTTSTTS
B

S




STT
SSTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence IFYIPAWLTSKIDPSTGFVNLLKTKYTSIADSKKFISSFDRIXYVPEEDLFEFALDYKNFSRTDADYIKK
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)

TTSSSS
TTT







S


SSTTTTGGGSSS
TT
SS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence WKLYSYGNRIRIFAAAAWEEVCLTSAYKELFNKYGINYQQGDIRALLCEQSDKAFYSSFXALXSLXLQXR
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)


S






ST

STT


TT

S

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence NSITGRTDVDFLISPVKNSDGIFYDSRNYEAQENAILPKNADANGAYNIARKVLWAIGQFKKAEDEKLDK
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)
SS
SS

TTS
STTTSSSSS
SS
SSTTS
TTTGGG
 .........1200.........
Sequence VKIAISNKEWLEYAQTSVK
Predicted secondary structure



SS confidence


















Known secondary structure (DSSP)








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D