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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5i8iD_

Fold library idPDB HeaderMoleculeTitle
c5i8iD_6.50PDB header: hydrolaseChain: D: PDB Molecule: urea amidolyase;


Added to library: Sat Apr 15 09:36:24 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STLGWSVQDWLSFHSKSTPTKSLELLENLLKSQKPAPEDPAWISLIPVEDLHHQWNILQSKSNKEELPLY
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Known secondary structure (DSSP)

TT

S
T


TTTSTT


TTGGG
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVPIAVKDNIDYKGLPTTAACPSYLYQPTRDSYVVELLRDAGAVVIGKTNLDQFATGLVGTRSPYGKTPC
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Known secondary structure (DSSP) T
TTB

TTS
B
TT
GGG
B

SS

TT


SGGG

SSS


TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence VFNDKYVSGGSSAGSASVVGRGIVPLSLGTDTAGSGRVPAALNNLIGLKPTKGAFSCRGVVPACKSLDCV
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Known secondary structure (DSSP) TT

SSSTTSSSSSSTTTTTT


TTTB

TTB

SSTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SVFALNLSDAEIAFKVMNKPDLLEDEYSREFPKNPISQYPKDLTIAIPKEVPWFGETENPKLYTKAVASL
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Known secondary structure (DSSP) SSB


TTT
TT




SS





TT
S



TT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence KNTGAKIVVVDFEPLLELARCLYEGAWVAERYCATRDFLATNPPESSLDETVVNIIKGAVKFDAADAFKF
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Known secondary structure (DSSP) TT


SSTTT


TTTS
GGGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence EYKRQGILQKVNLLLKDIDVLCVPTCPLNPKLEEVAQEPVLVNSRQGTWTNFVNLADLAALAVPSGFRSD
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Known secondary structure (DSSP) T
SS
S


B
TTTTTTTTTGGGT
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence GLPNGITLIGKKFSDYALLDLAKRFFSVAFPNNSRTYGKFVDRRITVEDELDGPSKDTLNGVKLAVVGAH
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Known secondary structure (DSSP) S
TT
STTT


BTTBTT


SSTT



S
GGG


STT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LKGLPLHWQLQKCNATYLSSPKTSNNYKLYALPKVGPVLKPGLRRVNDGTGSQIQLEVYSVPYDRFGDFI
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Known secondary structure (DSSP) STTSTTTTT


BB
TT



SSS


SSSS
B

B
TTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence AMVPEPLGIGSVELESGEWVKSFICEEFGYTQQGTVDITKFGGFKPYIEHIQKKPFETVLIANRGEIAVR
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Known secondary structure (DSSP) TT

TTBTTS

TTGGGSTT

GGGSS


S
S


 .........640.........650.........660.........670.........680.........690.........700
Sequence IMKTLKRMGIKSVAVYSDPDKYSQHVTDADFSVALHGRTAAETYLDIDKIINAAKKTGAQAIIPGYGFLS
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Known secondary structure (DSSP) T

STTTTSSS


SSTTTTTT
TT
S

SSGGG
 .........710.........720.........730.........740.........750.........760.........770
Sequence ENADFSDRCSQENIVFVGPSGDAIRKLGLKHSAREIAERAKVPLVPNARHVEIQMMGDGFGKAIAIGERD
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Known secondary structure (DSSP) G
TTT
SS

STTTT






SSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence CSLQRRNQKVIEETPAPNLPEATRAKMRAASERLGSLLKYKCAGTVEFIYDEQRDEFYFLEVNARLQVEH
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Known secondary structure (DSSP) TTS
SS

TT
TTTTSS

TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence PITEMVTGLDLVEWMLRIAANDSPDFDNTKIEVSGASIEARLYAENPVKDFRPSPGQLTSVSFPSWARVD
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Known secondary structure (DSSP)


TT



GGG





SSTTTTT





SSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence TWVKKGTNVSAEYDPTLAKIIVHGKDRNDAIMKLNQALNETAVYGCITNIDYLRSIASSKMFKEAKVATK
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Known secondary structure (DSSP)


TT

SSS

SST
SS

S
T


TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VLDSFDYKPCAFEVLAPGANTSVQDYPGRTGYWRIGVPPSGPMDSYSFRLANRVVGNNSKSPALEITLNG
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Known secondary structure (DSSP) GGGG




S

SS

SS
S
S
TTTT



S
SST

TT

SB
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence PKLLFHTETVIAVSGGTVSCTLNDAQIAQNEPIEVKRGDILSVGKVTVGCRAYLSIRGGIDVPEYLGSRS
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Known secondary structure (DSSP)
SS
TT

TTS

SS
TT
B



BTTB

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence TFAMGNMGGYNGRILKLGDVLFLNQPELSVSSLPAPDFEPQAAPKSLLPTLSTNKDWKIGVTCGPHGSID
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Known secondary structure (DSSP)
BGGGTBSTTTTS


TT
B

STT



S



S





GGGS



SSS
SS
STT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence LFKEEYIEQFFNDKWKVHYNSNRFGVRLIGPKPKWARSDGGEAGLHPSNAHDYVYSLGAINFTGDEPVII
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Known secondary structure (DSSP) TB
S
TT




BSSS

GGG
SSTT

TTTT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence TCDGPSLGGFVCQAVVAEAELWKVGQLTPGDTIQFVPLSYGVARQLKESQDKSIDNFEEGSLLELSDDKI
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Known secondary structure (DSSP)
TT




GGGTT

TT




TT





GGGS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence LPKYENPILAVLPKKSDLSPKVTYRQAGDRYILVEYGELEFDLNICYRINRLIHQVERHQTVGIVEMSQG
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Known secondary structure (DSSP)
SS






SSSS


STTSSSS

TT
TT
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence VRSVLIEFDGSKINQKALLKCLIAYESEIQFDKNWNVKSKIFKLPMAFEDSKTLDCVTRYRETIRSEAPW
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Known secondary structure (DSSP) SS
TTTS
TT



TT
T
T
S

TT
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence LPNNVDFIADVNDIDRNDVKNMLYSAKFMVLGLGDVFLGSPCAVPLDPRHRYLGTKYNPSRTYTARGVVG
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Known secondary structure (DSSP)
S
TTS
TT


TTSTT
SSGGG






SS
BS


TT
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence IGGMYMCIYNAEGSPGGYQLVGRTITAWDKLVIGDHPIDHPWLLTPFDQVEFYPVTEEELEVIIEDNDNG
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Known secondary structure (DSSP) TT

STT

B
S


SB
TTS
SBSS
SSSB


TT


TT
 .........1620.........1630.........1640.........1650........
Sequence KFKIDVEESIFDHKEYLAWINENIDSIVAFQEAQGGEKADEFARLIQV
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Known secondary structure (DSSP)
SB
TTTS
ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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