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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5i7iB_

Fold library idPDB HeaderMoleculeTitle
c5i7iB_1.30PDB header: transport proteinChain: B: PDB Molecule: trap solute binding protein;


Added to library: Thu Feb 9 11:30:42 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMEVVLKFHSFPPMPANSNAKFVKPWSEKVLAESNGEIKVEIYPAMQLGGKPPQLVDQVRDGVVDIVWTV
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Known secondary structure (DSSP)


SS
TTSTTTTT

TTTTSS
GGGTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGYTPGRFPHLEAFELPFMPASAEATSQALQEYVDTVAASDLKDYKVLAVFCHAPGKIHTKEKVIKSAAD
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Known secondary structure (DSSP) GGGSTTSSGGGGGGGSTT



TTTGGGGTT
S

SS



SGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LNGMKMRGPTRVITKMLEGLGATPVGMPVPAVAGALSKGVIDGMVVPWEIMPSFKLHELTKAHTTVSGSR
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Known secondary structure (DSSP) GTT
SSTT


GGGTS
S
STTSGGGT


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GLYTTPFLFLMNKAKYESLSDEHKKVIDNNAGLALAKLAGQLWDGFEVPARKLALDAGGTIHSLSGGPLA
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Known secondary structure (DSSP)
S


S
TSSTT

 .........290.........300.........310.........320
Sequence EMKAAGEGLEKDWIKSANDRGLDGAMLVKTAKDLISKYDK
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Known secondary structure (DSSP) TTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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