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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5i6hA_

Fold library idPDB HeaderMoleculeTitle
c5i6hA_7.20PDB header: ligaseChain: A: PDB Molecule: acetyl-coa carboxylase-like protein;


Added to library: Sat Apr 23 09:15:53 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPVVVGSKPAQRFAVLYGTMCDILNGYDNQVVMQQKLKEFIEVLRDPKLPYSEFSAQFSALHARMPHKLD
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Known secondary structure (DSSP)



TT
TTT
S



TTS
TTTTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AQLTQVLERAQNRGAEFPARQLLKVFNKFLDDNVPNKTDQDLLKSTLEPLTSVLNLYLDGQKARELNLIA
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Known secondary structure (DSSP) SSSS

TTT
TTTT
SSTTSTTTTS
STTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DLLSMYADVECQFSGRRLQDEEAILKLRDQYKDNIQKVVNTVLSHKNVMSKNSLVLALLDEYRPNKPNVG
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Known secondary structure (DSSP) STTTTSSS


GGG
STTS
TTTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NVGKHLRPVLRRLTELESRQSAKVSLKAREVLILCSLEERTAQMEHILRSSVVQSRYGETGWSHRRPDRE
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Known secondary structure (DSSP) TTTTTTTTSS

STTT

S


SS
S

SSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence VLKEVVDSKYTVFDVLTLFFAHEDPYVALAALEVYVRRAYRAYNLREVRYHDEERPYFIDWDFVPSSPAT
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Known secondary structure (DSSP) T
SS
STTTSSSS
TTSS






SSSTT






SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence PVENDFKRIHSISDMTYLARRTRDEPIRKGVIVPCKDLLDAEEALSRALEVLPAVVNVAVRDAEGKNDEE
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Known secondary structure (DSSP) S
B

SS



SS
S
S

S
SSSS




SSTTGGGTGGGS




TTS


ST
 .........430.........440.........450.........460.........470.........480.........490
Sequence ILALIKPWVQNSKADLLARRVRRLTFICGRNDGSYPSYYTFRGPDYAEDDSIRHIEPSLAFQLELGRLSK
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Known secondary structure (DSSP) TTTTTTTTTT



TTS


B
BTTTT


TTSBSS
TTT

TT
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence FKLTPVFTQNKNIHVYEAVGRGVETDRRYFTRAVVRPGRLAEYLISEADRVVNDIFDALEIIGTNKTDLN
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Known secondary structure (DSSP)

SSSSSS
SS









S
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence HMFINFSHTFQVTADEVAESLQGFLDRFGPRGWRLRVHQVEIRINCMRSENDTMPLRVIITNTSGFVIQI
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Known secondary structure (DSSP)



S

TT



S



S


TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence ELYEEKLSEKGEWVYYYVSGNAKIGSMHLLPVSTPYPTKNWLQPKRYKAHILGTQYVYDFPELFRQAIQN
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Known secondary structure (DSSP)


SSSB



SSTT

S

S
BTT




SSTTTTT


GGG
 .........710.........720.........730.........740.........750.........760.........770
Sequence SWTEAVKKIPSLAAKQPAIGECIDYNELVLGDQDNLAEVSREPGMNSTGMVGWLINARTPEYPDGRKFIV
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Known secondary structure (DSSP) S
STTTT


STTS



TTS




SS

SSS

SSSTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence VANDITFKIGSFGPKEDTFFFKCTELARKMGIPRIYLSANSGARLGLAEELMPHFNVAWNDPAKPEAGFK
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Known secondary structure (DSSP)
TTSGGG
B






SB




STTTTT
SSSS
TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence YLYLSDEAKRRFENEVITEEIVEDGEKRHKIITIVGAEEGLGVECLRGSGLIAGATSRAYNDIFTCTLVT
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Known secondary structure (DSSP)
TTTSSSTT

SSS
SSTTS
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence CRSVGIGAYLVRLGQRAVQVEGQPIILTGAPALNSLLGREVYTSNLQLGGTQIMYRNGVSHLTAKDDFDG
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Known secondary structure (DSSP) S
B
TT
STT

B
SS
SS




SSTTTTS
SSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VTKIVQWLSFIPDQRNNPLPILSPSPDPWDRDVVYTPPYKQTYDVRWMIAGKEDEDGFQPGLFDKDSFVE
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Known secondary structure (DSSP) S
SSSSS





STTS
SS







SSS


TT
SSS
SS
TT

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence TLGGWARTVVVGRARLGGIPMGVIAVETRTIENITPADPANPDSIEQVTNEAGGVWYPNSAFKTAQAIND
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Known secondary structure (DSSP) STTS
TTTT

S



SSSSS



TT
B
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence FNYGEQLPLMILANWRGFSGGQRDMYNEVLKYGSFIVDALTRFEKPIFIYIPPHGELRGGSWVVVDPTIN
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Known secondary structure (DSSP) TTS







B


TT

S

TT
B

TT
TTSS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence PASMEMYADEEARGGVLEPEGIIPIKYKKDKQLETMARLDPVYRSLKKEMAKEGLSKEESDNIKKKMQQR
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Known secondary structure (DSSP) TTTTT
B

SS
S

T



 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence EELLLPIYHQICVQFADLHDRAGRMKAKGVIRQSLQWRQSRRFFYWRVRRRLIEDDILRRIEEAINPANT
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Known secondary structure (DSSP) SBTTSSS

GGG




 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence SLAASPETRSPHLVQLESWVGIPGFKTNDREVVEWYEQNQDRINEKLEKLKKESIADQMRELXXXXXXXX
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Known secondary structure (DSSP) STT

GGGS
TTTT

SS
SS



 ....
Sequence XXXX
Predicted secondary structure



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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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