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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5i62A_

Fold library idPDB HeaderMoleculeTitle
c5i62A_2.00PDB header: viral protein, replicationChain: A: PDB Molecule: potential rna-dependent rna polymerase;


Added to library: Sat Mar 19 08:21:20 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GQVAPNVWSKYFNIPNPGLRAYFSNVVSGQPEVYRTPFYKGMSLESICDEWYKKLVSIDTQWPTLMEFED
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Known secondary structure (DSSP)
B

S
S


B



STTTTS
GGGTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DLRKKVGPMSVMLPLKERMSDIDSYYDSISKDQVPFDTKAISAAKSEWKGVSRLRLRSEVNTVAVMKKST
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Known secondary structure (DSSP) TT
S



B

GGGTGGGS





TTTT


B



S
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NSGSPYFSKRKAVVSKTIPCDVYMDGRYCVMRQNGREWSGAAVLGWRGQEGGPKPTDVKQRVVWMFPFAV
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Known secondary structure (DSSP) B

TTT
SB
STTTT


SSSGGG


 .........220.........230.........240.........250.........260.........270.........280
Sequence NIRELQVYQPLILTFQRLGLVPAWVSMEAVDRRITKMFDTKGPRDVVVCTDFSKFDQHFNPTCQSVAKEL
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Known secondary structure (DSSP) TSSGGGT
S
TT


SSTGGG

 .........290.........300.........310.........320.........330.........340.........350
Sequence LADLLTGQEAVDWLERVFPIKYAIPLAYNWGEIRYGIHGMGSGSGGTNADETLVHRVLQHEAAISHHTTL
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Known secondary structure (DSSP) B
STGGGGGT

TT
S

S

TT
TTTTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence NPNSQCLGDDGVLTYPGISAEDVMQSYSRHGLDMNLEKQYVSKQDCTYLRRWHHTDYRVDGMCVGVYSTM
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Known secondary structure (DSSP)
TT
TT

TT

TTT



GGG
SSTTTT

BTTB



 .........430.........440.........450.........460.........470.........480.........490
Sequence RALGRLAMQERYYDPDVWGEKMVTLRYLSIIENVKYHPLKEEFLDFCIKGDKTRLGLGIPGFLDNIAGEA
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Known secondary structure (DSSP) SS



SGGGTT
TTT
TTGGGTTSTTTGGG
 .........500.......
Sequence QKGIENWWVVQALKSRR
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Known secondary structure (DSSP)

GGG
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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