Fold library entry viewer: c5i08A_

Added to library: Sat Mar 5 08:24:20 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	G	D	F	N	C	T	N	S	F	I	N	D	Y	N	K	T	I	P	R	I	S	E	D	V	V	D	V	S	L	G	L	G	T	Y	Y	V	L	N	R	V	Y	L	N	T	T	L	L	F	T	G	Y	F	P	K	S	G	A	N	F	R	D	L	A	L	K	G	S	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					S	S																			T	T	S	S	S	S		B			T	T					S												T	T									B		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	T	L	W	Y	K	P	P	F	L	S	D	F	N	N	G	I	F	S	K	V	K	N	T	K	L	Y	V	N	N	T	L	Y	S	E	F	S	T	I	V	I	G	S	V	F	V	N	T	S	Y	T	I	V	V	Q	P	H	N	G	I	L	E	I	T	A	C	Q	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	G	S	T	T	T					S	S													S	S	S													S	S		S	T	T	S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	C	E	Y	P	H	T	V	C	K	S	K	G	S	I	R	N	E	S	W	H	I	D	S	S	E	P	L	C	L	F	K	K	N	F	T	Y	N	V	S	A	D	W	L	Y	F	H	F	Y	Q	E	R	G	V	F	Y	A	Y	Y	A	D	V	G	M	P	T	T	F	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S			B			S	S	S			S				T	T	S	T	T		S														T	T		S										T	T								S	S		S	S	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	L	Y	L	G	T	I	L	S	H	Y	Y	V	M	P	L	T	C	N	A	I	S	S	N	T	D	N	E	T	L	E	Y	W	V	T	P	L	S	R	R	Q	Y	L	L	N	F	D	E	H	G	V	I	T	N	A	V	D	C	S	S	S	F	L	S	E	I	Q	C	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S										B		S	T	T	S	S	S	S	G	G	G																					T	T									G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	S	F	A	P	N	T	G	V	Y	D	L	S	T	V	Y	R	R	I	P	N	L	P	D	C	D	I	D	N	W	L	N	N	V	S	V	P	S	P	L	N	W	E	R	R	I	F	S	N	C	N	F	N	L	S	T	L	L	R	L	V	H	V	D	S	F	S	C	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S	S			S													S	S											T		S					G	G	G								S											T	S									S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	D	K	S	K	I	F	G	S	C	F	N	S	I	T	V	D	K	F	A	I	P	N	R	R	R	D	D	L	Q	L	G	S	S	G	F	L	Q	S	S	N	Y	K	I	D	I	S	S	S	S	C	Q	L	Y	Y	S	L	P	L	V	N	V	T	I	N	N	F	N	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											S											S	T	T	G	G	G	G	S	S	S			S	S											S	S	S										S	S	S									S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	W	N	R	R	Y	G	F	G	S	F	N	L	S	S	Y	D	V	V	Y	S	D	H	C	F	S	V	N	S	D	F	C	P	C	F	L	G	W	S	F	D	S	C	I	S	N	N	R	C	N	I	F	S	N	F	I	F	N	G	I	N	S	G	T	T	C	S	N	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T							S	S							S						T	T										S								B	T	T											S	S	S	S	S	S	S					T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	Y	S	N	T	E	I	S	T	G	V	C	V	N	Y	D	L	Y	G	I	T	G	Q	G	I	F	K	E	V	S	A	A	Y	Y	N	N	W	Q	N	L	L	Y	D	S	N	G	N	I	I	G	F	K	D	F	L	T	N	K	T	Y	T	I	L	P	C	Y	S	G	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S	S						T	T																	T	T	T						T	T									T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	A	A	F	Y	Q	N	P	A	L	L	Y	R	N	L	K	C	S	Y	V	L	N	N	I	F	Y	F	D	S	Y	L	G	C	V	L	N	A	V	N	L	T	S	Y	S	V	S	S	C	D	L	R	M	G	S	G	F	C	I	D	Y	P	Y	R	F	V	T	F	E	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T									T							S	S				S	S		B				S	S	B		S	S		S		B		S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	N	N	F	T	I	A	G	H	E	E	F	I	Q	T	S	S	P	K	V	T	I	D	C	S	A	F	V	C	S	N	Y	A	A	C	H	D	L	L	S	E	Y	G	T	F	C	D	N	I	N	S	I	L	N	E	V	N	D	L	L	D	I	T	Q	L	Q	V	A	N	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T	T	T	T			S		T											T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	M	Q	G	V	T	L	S	S	N	L	N	T	L	L	E	D	L	L	F	N	K	V	K	L	S	D	V	G	F	V	E	A	Y	N	N	C	T	G	G	S	E	I	R	D	L	L	C	V	Q	S	F	N	G	I	K	V	L	P	P	I	L	S	E	T	Q	I	S	G	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T					T	T									G	G	G	T	S													T	T	S	S	S		S			T	T							S	S							S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	T	A	A	T	V	A	A	M	F	P	P	W	S	A	A	A	G	V	P	F	S	L	N	V	Q	Y	R	I	N	G	L	G	V	T	M	D	V	L	N	K	N	Q	K	L	I	A	N	A	F	N	K	A	L	L	S	I	Q	N	G	F	T	A	T	N	S	A	L	A	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T		S	S	S	S	S											T	T	S	S		S	S	S					T	T	T															G	G	G	G	S			S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	Q	S	V	V	N	A	N	A	Q	A	L	N	S	L	L	Q	Q	L	F	N	K	F	G	A	I	S	S	S	L	Q	E	I	L	S	R	L	D	N	L	E	A	Q	V	Q	I	D	R	L	I	N	G	R	L	T	A	L	N	A	Y	V	S	Q	Q	L	S	D	I	T	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	G	G	G			S	S	S	S	S		S	T									S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.
Sequence	K	A	G	A	S	R	A	I	E	K	V	N	E	C	V	K	S	Q	S	P	R	I	N	F	C	G	N	G	N	H	I	L	S	L	V	Q	N	A	P	Y	G	L	L	F	I	H	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	T	T	S			S		S	S	S	S		S	S			S								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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