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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5hx2E_

Fold library idPDB HeaderMoleculeTitle
c5hx2E_3.80PDB header: viral proteinChain: E: PDB Molecule: baseplate wedge protein gp6;


Added to library: Sat Mar 5 08:23:08 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AEIKQNLIEWLNGQNEFLDYDFEGSRLNVLCDLLAYNTLYIQQFGNAAVYESFMRTANLRSSVVQAAQDN
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Known secondary structure (DSSP)
TTTS

STTSSSTTSSSSSSS

SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GYLPTSKSAAQTEIMLTCTDALNRNYITIPRGTRFLAYAKDTSVNPYNFVSREDVIAIRDKNNQYFPRLK
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Known secondary structure (DSSP) S










SS

SS

B
S




STT
SS
S
B




SSS
B



 .........150.........160.........170.........180.........190.........200.........210
Sequence LAQGRIVRTEIIYDKLTPIIIYDKNIDRNQVKLYVDGAEWINWTRKSMVHAGSTSTIYYMRETIDGNTEF
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Known secondary structure (DSSP) S



B

SSS


B

TT


SSS


B
TTS
STTS
TTB

B


TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence YFGEGEISVNASEGALTANYIGGLKPTQNSTIVIEYISTNGADANGAVGFSYADTLTNITVININENPND
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Known secondary structure (DSSP)









SS






SSSB



TT
B





GGG
S







SS
S
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence DPDFVGADGGGDPEDIERIRELGTIKRETQQRCVTATDYDTFVSERFGSIIQAVQTFTDSTKPGYAFIAA
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Known secondary structure (DSSP)
SS






SS

STS

S


STTT


TTS
S


 .........360.........370.........380.........390.........400.........410.........420
Sequence KPKSGLYLTTVQREDIKNYLKDYNLAPITPSIISPNYLFIKTNLKVTYALNKLQESEQWLEGQIIDKIDR
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Known secondary structure (DSSP) SSSSS

TTTSSSTTT

SS




B









GGG

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence YYTEDVEIFNSSFAKSKMLTYVDDADHSVIGSSATIQMVREVQNFYKTPEAGIKYNNQIKDRSMESNTFS
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Known secondary structure (DSSP) TTTSSSS
B

TSSS








SSTTT

SSB


SS
B
TT







 .........500.........510.........520.........530.........540.........550.........560
Sequence FNSGRKVVNPDTGLEEDVLYDVRIVSTDRDSKGIGKVIIGPFASGDVTENENIQPYTGNDFNKLANSDGR
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Known secondary structure (DSSP)


S





TTT

S











SSS



TTSSSS


SS





S
S




SS

 .........570.........580.........590.........600.........610.........620.........630
Sequence DKYYVIGEINYPADVIYWNIAKINLTSEKFEVQTIELYSDPTDDVIFTRDGSLIVFENDLRPQYLTIDLE
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Known secondary structure (DSSP)






BTTTTBB


GGGG


TTS



S



BSSSS
B

SS





GGG
TTS





 ....
Sequence PISQ
Predicted secondary structure


SS confidence



Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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