Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5hx2A_

Fold library idPDB HeaderMoleculeTitle
c5hx2A_3.80PDB header: viral proteinChain: A: PDB Molecule: baseplate wedge protein gp7;


Added to library: Sat Mar 5 08:26:04 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VKAPSVTSLRISKLSANQVQVRWDDVGANFYYFVEIAETKTNSGENLPSNQYRWINLGYTANNSFFFDDA
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)
B






S

SS





SS



SSSS



TTSS


SSS




 .........80.........90.........100.........110.........120.........130.........140
Sequence DPLTTYIIRVATAAQDFEQSDWIYTEEFETFATNAYTFQNMIEMQLANKFIQEKFTLNNSDYVNFNNDTI
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
TT




SSSB




TT



SS

B

B

SS

TTT


SSS
TTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence MAALMNESFQFSPSYVDVSSISNFIIGENEYHEIQGSIQQVCKDINRVYLMESEGILYLFERYQPVVKVS
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
B



SS



S


STTS

B










BTTBSSS

SSS


SS



 .........220.........230.........240.........250.........260.........270.........280
Sequence NDKGQTWKAVKLFNDRVGYPLSKTVYYQSANTTYVLGYDKIFYGRKSTDVRWSADDVRFSSQDITFAKLG
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) SSTTSS




S




SSS


B
SSS

B
SS






S



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence DQLHLGFDVEIFATYATLPANVYRIAEAITCTDDYIYVVARDKVRYIKTSNALIDFDPLSPTYSERLFEP
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) S
TT

SS






S

SSSSSSS


SSB
SSS




BSSS





SSS

SS




S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DTMTITGNPKAVCYKMDSICDKVFALIIGEVETLNANPRTSKIIDSADKGIYVLNHDEKTWKRVFGNTEE
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)




TT
TT

B



B
SS
B


B
S
STTSSSS
TTS




TT
B




TTTT




S

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ERRRIQPGYANMSTDGKLVSLSSSNFKFLSDNVVNDPETAAKYQLIGAVKYEFPREWLADKHYHMMAFIA
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) T

SSS





TTT



B





GGG

TTS

S








B
SSSS

B



 .........500.........510.........520.........530.........540.........550.........560
Sequence DETSDWETFTPQPMKYYAEPFFNWSKKSNTRCWINNSDRAVVVYADLKYTKVIENIPETSPDRLVHEYWD
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)
STTTS
S





SSSSGGGSB

SGGG

TTS




B








SSSS




S
 .........570.........580.........590.........600.........610.........620.........630
Sequence DGDCTIVMPNVKFTGFKKYASGMLFYKASGEIISYYDFNYRVRDTVEIIWKPTEVFLKAFLQNQEHETPW
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) SS









S


S


B
SSS





SS


S



TTTS


B

B








 .........640.........650.........660.........670.........680.........690.........700
Sequence SPEEERGLADPDLRPLIGTMMPDSYLLQDSNFEAFCEAYIQYLSDGYGTQYNNLRNLIRNQYPREEHAWE
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)




SS




STTS
TTSS

STSSSSSTTTTSSSTTSTT

S
 .........710.........720.........730.........740.........750.........760.........770
Sequence YLWSEIYKRNIYLNADKRDAVARFFESRSYDFYSTKGIEASYKFLFKVLYNEEVEIEIESGAGTEYDIIV
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) STTS


SSTTSSSSS
TTSTTSSSSS




BSS
S

 .........780.........790.........800.........810.........820.........830.........840
Sequence QSDSLTEDLVGQTIYTATGRCNVTYIERSYSNGKLQWTVTIHNLLGRLIAGQEVKAERLPSFEGEIIRGV
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
SS

S

TTS
SS


B


SSS
S
B
TT


SSS




S
B
 .........850.........860.........870.........880.........890.........900.........910
Sequence KGKDLLQNNIDYINRSRSYYVMKIKSNLPSSRWKSDVIRFVHPVGFGFIAITLLTMFINVGLTLKHTETI
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)




SS

SS

TT

B


SS
STTTTTTSS
TTS

B




















 .........920.........930.........940.........950.........960.........970.........980
Sequence INKYKNYKWDSGLPTEYADRIAKLTPTGEIEHDSVTGEAIYEPGPMAGVKYPLPDDYNAENNNSIFQGQL
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP)


B



S





S



B
SSTTTSS
S
SSS
SS


B

S







STT

SS

B
SSSBSS
 .........990.........1000.........1010.........1020.........1030
Sequence PSERRKLMSPLFDASGTTFAQFRDLVNKRLKDNIGNPRDPENPTQVKIDE
Predicted secondary structure



























SS confidence

















































Known secondary structure (DSSP) SSSS

S



SS
SSS
SSS

B

SS



SS
SSS

SS
S






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D