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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5hvnA_

Fold library idPDB HeaderMoleculeTitle
c5hvnA_3.00PDB header: lyaseChain: A: PDB Molecule: 3-dehydroquinate synthase;


Added to library: Sat Feb 13 08:19:41 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNAMISKLSVNPTFSPSYNIIVDSVLDFSHILEYVTNKQVLVVTNTTVAKLYLTKFLAALVDDLDVRTCI
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Known secondary structure (DSSP)





TTS

SS

GGGGGGGTTTS
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LEDGEQYKSQQSLDKILSTLLENHFTRNSTVLVALGGGVIGDITGFAAAIYQRGIDFIQIPTTLLSQVDS
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Known secondary structure (DSSP)
SSGGGSSTT

STTSGGG


ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence SVGGKTAINHQLGKNMIGAFYQPKVVYTSIEFYKTLPQREYIAGMAEVVKYAFISKDFYLWLDSNRDKIL
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Known secondary structure (DSSP) TSS
TT


SGGGGGTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence AKDSVTLIEMVKRSCQIKAQVVAMDTGARAILNFGHTFGHAIEKCQNYRGLKHGEAVGVGMAQAIDFSHY
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Known secondary structure (DSSP) TT
TT


GGGGGGTTTTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LGLISQQQAKDFNDFIVSFGISIDFPNDICQKEFLEAMLLDNKELKFILIENIGSLSLQKQSKNELEQFL
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Known secondary structure (DSSP) TTSS
TT





TT







TT

 ....
Sequence DISR
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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