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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5hp5A_

Fold library idPDB HeaderMoleculeTitle
c5hp5A_3.20PDB header: hydrolaseChain: A: PDB Molecule: protein-arginine deiminase type-1;


Added to library: Sat Jul 30 14:16:07 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HIEGRHMAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVKEPIG
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Known secondary structure (DSSP)

S








B


SSS
TT

B
TTSS

TT

SS
SSS



 .........80.........90.........100.........110.........120.........130.........140
Sequence KARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLEVDTGRTGKVKRSQG
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Known secondary structure (DSSP) SS
S
SSS


S

SSTT

SS
SS
S

SSSSS




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDMSPMLLSCNGPDKLFDSHKLVLNVP
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Known secondary structure (DSSP)


S


STT

S
B

S
S
SS
SS
GGG
SS


SGGGGGSS
TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence FSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYEVERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDP
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Known secondary structure (DSSP) TTTTTTSS
SSGGG
SS





TT





BTTB
ST
 .........290.........300.........310.........320.........330.........340.........350
Sequence GTLPEVTLFTDTVGFRMAPWIMTPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVEN
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Known secondary structure (DSSP) T
SS





TTS




SSS

TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence RNDRWIQDEMEFGYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDV
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Known secondary structure (DSSP) TT



TTT
SS

TT
SSSTTTT

SS




TT


GGGSGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence SPPVTVGGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDEFLTFVPTSD
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Known secondary structure (DSSP)


TTTT

S
TTSS


S
T
SS


TTBSS

TTTT
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence QKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKHQAKRSINEMLADRHLQRDNLHAQKCIDWNRNVL
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Known secondary structure (DSSP) SSSSSS

S

BS
SS
SS

B
SS

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence KRELGLAESDIVDIPQLFFLKNFYAEAFFPDMVNMVVLGKYLGIPKPYGPIINGRCCLEEKVQSLLEPLG
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Known secondary structure (DSSP) T

TTT

TTSS

SSS
TT




TTGGGT
 .........640.........650.........660.........
Sequence LHCIFIDDYLSYHELQGEIHCGTNVRRKPFPFKWWNMVP
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Known secondary structure (DSSP)


TTTTGGGT




SS
GGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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