Fold library entry viewer: c5ho0A_

Added to library: Thu Feb 9 11:14:46 2017
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	P	Q	F	T	N	V	S	V	H	D	P	S	I	V	K	D	G	D	T	Y	Y	I	F	G	S	H	I	E	A	A	K	S	K	D	L	M	N	W	E	K	F	T	N	G	Y	T	T	P	N	N	K	L	Y	G	D	L	S	K	N	L	A	G	S	F	K	W	A	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B					S	S							T	T							G	G	G						S	S	S	S	B							T	T			S	S	B	T	T	T	B	S					S					T	T	S	S	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	D	A	D	S	K	G	G	F	A	V	W	A	P	D	V	F	W	N	K	D	Y	V	N	E	D	G	T	K	G	A	Y	M	I	Y	Y	S	V	S	S	T	Y	I	R	S	A	I	G	Y	A	V	S	K	H	I	E	G	P	Y	K	Y	V	D	T	I	V	Y	S	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	G	G	G	T	T	S	B																T	T	S													S	S	S	S										S	S	T	T													S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	K	E	E	A	Y	D	A	N	S	K	I	N	K	K	W	T	N	T	N	I	P	K	L	I	E	Q	G	K	L	K	G	V	R	A	D	W	F	H	N	D	G	S	Y	N	N	R	D	F	P	N	A	I	D	P	N	L	F	Y	D	E	K	G	N	L	W	M	A	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	S					T	T						B	G	G	G	S	S							T	T	S		S	S			G	G	G	B		T	T	S		B		T	T	T	S												T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	W	S	G	G	I	F	V	L	P	M	D	K	T	T	G	K	P	I	Y	P	G	K	D	G	K	T	P	D	G	R	L	V	D	R	Y	F	G	I	K	I	A	G	G	Y	Y	Q	S	G	E	G	T	Y	I	V	Y	D	K	N	T	D	Y	Y	Y	L	Y	V	T	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T									T	T	T	S		B					S					T	T						T	T	T						B		T													T	T	T	T									S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	W	L	G	A	D	G	G	Y	N	M	R	Q	F	R	S	T	S	P	T	G	P	Y	V	D	A	K	G	Q	S	A	V	L	P	G	E	V	D	N	S	P	Y	G	N	K	I	M	G	N	F	L	F	E	R	K	V	G	D	P	G	T	G	I	G	V	G	Y	V	S	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	S	T	T	T	B									S	S	T	T				B		T	T			B	S	B		S	S	S				T	T	S	S						S							T	T	S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	N	S	V	Y	L	D	R	K	T	G	Q	Q	F	L	V	F	H	T	R	F	P	Q	S	G	E	Y	H	E	V	R	V	H	Q	M	F	M	N	K	N	G	W	P	V	V	A	P	Y	R	Y	A	G	E	K	L	E	K	V	N	K	Q	D	V	V	G	E	Y	Q	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T												T	T	S	T	T													T	T	S						S	S			S	S								G	G	G	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	H	G	K	D	Y	S	A	D	I	K	K	Q	I	F	V	R	L	N	R	N	N	T	I	S	G	D	A	T	G	T	W	R	K	I	G	H	N	Q	A	E	I	T	I	D	G	E	T	Y	D	G	V	F	V	R	Q	W	D	P	T	S	K	R	Y	V	M	A	F	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			S	S												T	T	S					S	S								T	T	T							T	T													T	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	S	N	E	G	V	S	I	W	G	S	K	L	A	D	K	T	D	E	E	I	V	E	D	V	A	S	D	L	D	L	G	D	T	D	H	V	V	S	N	L	H	L	P	T	E	G	T	R	H	T	V	I	S	W	T	T	S	D	A	K	V	V	S	E	T	G	V	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		B																													S	S	B		S						S	B		G	G	G								S		T	T	T	B		T	T			B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	P	E	V	G	S	A	P	V	T	A	T	L	T	A	T	I	T	K	G	D	A	T	A	T	K	V	F	H	I	T	V	L	P	Y	E	E	A	K	L	T	A	H	Y	S	F	D	N	N	D	L	S	D	S	T	G	N	F	G	P	G	T	I	T	G	N	R	I	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S														T	T																										T	T	S	S				T	T	S	S	S							S	S	S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	G	G	T	I	A	Y	A	D	G	K	I	G	K	A	A	V	L	N	G	Q	S	G	I	R	L	P	D	G	L	V	S	S	N	Q	Y	S	V	S	L	W	V	K	P	E	Q	L	T	T	H	T	T	T	F	F	G	A	K	D	P	N	H	W	I	S	L	V	P	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S							S	S							T	T	S			S	S															T	T			S							T	T							S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	W	D	G	N	T	M	L	W	S	G	S	S	P	W	Y	D	G	R	T	F	W	K	I	P	T	G	Q	W	T	H	L	A	F	S	V	D	N	G	A	V	K	V	Y	I	N	G	V	E	K	F	S	G	T	N	F	P	D	V	F	T	G	A	N	A	S	F	A	L	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S								S	S												S	S	S										T	T							T	T							S						S	T	T								S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.
Sequence	N	W	W	D	P	P	F	K	G	L	I	D	E	L	R	I	Y	E	G	A	L	T	P	S	Q	V	T	D	L	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S															S

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FASTA sequence

Hidden Markov model

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