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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5hkjA_

Fold library idPDB HeaderMoleculeTitle
c5hkjA_1.35PDB header: signaling proteinChain: A: PDB Molecule: complement c1q subcomponent subunit a,complement c1q


Added to library: Sat Mar 5 09:37:57 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DQPRPAFSAIRRNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEICLSIVSSSR
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SSB



TS
TTTT
SS
SS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGSEADSVFSGFLIFPSAKFQSV
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Known secondary structure (DSSP) T





SSS

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 .........150.........160.........170.........180.........190.........200.........210
Sequence FTVTRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHTANLCVLLYRSGVKVVT
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SS


TTSB




TT

TTTT
SS
SS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSGFLLFPDGSAKATQKIAFSATRT
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TT


TTSS
GGG



 .........290.........300.........310.........320.........330.........340.........350
Sequence INVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGNLCVNLMRGRERAQKVVTFCD
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S


TT
B



TS
TTTT
SS
SS
SSS
 .........360.........370.........380.........390.........400..
Sequence YAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANSIFSGFLLFPDM
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Known secondary structure (DSSP)

SSS

TT


B
BTTB

S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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