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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5hhlA_

Fold library idPDB HeaderMoleculeTitle
c5hhlA_2.10PDB header: rna binding proteinChain: A: PDB Molecule: retron-type reverse transcriptase;


Added to library: Sat May 7 08:39:13 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDTSNLMEQILSSDNLNRAYLQVVRNKGAEGVDGMKYTELKEHLAKNGETIKGQLRTRKYKPQPARRVEI
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Known secondary structure (DSSP)


TTTS




TT


GGGTT






 .........80.........90.........100.........110.........120.........130.........140
Sequence PKPDGGVRNLGVPTVTDRFIQQAIAQVLTPIYEEQFHDHSYGFRPNRCAQQAILTALNIMNDGNDWIVDI
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Known secondary structure (DSSP)
SSSS

TTS
TTB
TT
TT

TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence DLEKFFDTVNHDKLMTLIGRTIKDGDVISIVRKYLVSGIMIDDEYEDSIVGTPQGGNLSPLLANIMLNEL
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Known secondary structure (DSSP)
B



TT


T



GGGGGT

S

SS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DKEMEKRGLNFVRYADDCIIMVGSEMSANRVMRNISRFIEEKLGLKVNMTKSKVDRPSGLKYLGFGFYFD
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Known secondary structure (DSSP) TT
TTSSTT


B
TTT

GGG
TT
 .........290..
Sequence PRAHQFKAKPHA
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Known secondary structure (DSSP) TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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