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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5heaA_

Fold library idPDB HeaderMoleculeTitle
c5heaA_2.00PDB header: transferaseChain: A: PDB Molecule: putative glycosyltransferase (galt1);


Added to library: Thu Feb 9 18:49:17 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence GELISIIVPVYNVEKYLKRCLDSLLRQTYKNFEIILINDGSTDNSSIICEEYAKIDNRIQILHQTNAGPS
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Known secondary structure (DSSP)


SS
TTTT
S



S
SSS
TT




 .........80.........90.........100.........110.........120.........130.........140
Sequence AARNAGITYASGKYITFVDSDDFVEEFYLEHLYRALVDNGSDISVCNFNSFNEDRQSFLFSITKEKYFCK
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Known secondary structure (DSSP)

SS

TT

TTTTT
STTTT

S
GGG

 .........150.........160.........170.........180.........190.........200.........210
Sequence NYTIAEWMDLNLFLTFTFSPTKLFKAELFEGIRFPLGRLREDDATIYRLYLKASQITFINEGSYYYSQRD
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Known secondary structure (DSSP) TT

T

SSGGGGTT



TT
SSTTTTT
S

 .........220.........230.........240.........250.........260.........270......
Sequence DISSMISNAEERIALLASMGYDLTEQIKSYKGRLKKCCEDALRNGQIELYQQCCNKLDLIENYPKE
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Known secondary structure (DSSP)
TT


TT
S



Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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