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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5h3oA_

Fold library idPDB HeaderMoleculeTitle
c5h3oA_3.50PDB header: transport proteinChain: A: PDB Molecule: cyclic nucleotide-gated cation channel;


Added to library: Fri Feb 10 03:33:04 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RKYLANYTQDPSTDNFYYWTCVVTVAYIYNLLFVIARQVFNDLIGPSSQSLCRFYNTTQVECTYNMLTNM
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Known secondary structure (DSSP)
GGGTS

B
SSS
TTSS

S


B




B



TTTTBS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEMPTYSQYPDLGWSKYWHFRMLWVFFDLLMDCVYLIDTFLNYRMGYMDQGLVVREAEKVTKAYWQSKQY
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Known secondary structure (DSSP) SS




SS
STTT

TB

TT


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RIDGISLIPLDYILGWPIPYINWRGLPILRLNRLIRYKRVRNCLERTETRSSMPNAFRVVVVVWYIVIII
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Known secondary structure (DSSP) T


TSS

SSS



GGGGGGGGGGTT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HWNACLYFWISEWIGLGTDAWVYGHLNKQSLPDDITDTLLRRYVYSFYWSTLILTTIGEVPSPVRNIEYA
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Known secondary structure (DSSP) S
TTSSSSSSSTTSTTTS
TTSB

T


S



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence FVTLDLMCGVLIFATIVGNVGSMISNMSAARTEFQNKMDGIKQYMELRKVSKQLEIRVIKWFDYLWTNKQ
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Known secondary structure (DSSP) TTTT

S
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence SLSDQQVLKVLPDKLQAEIAMQVHFETLRKVRIFQDCEAGLLAELVLKLQLQVFSPGDFICKKGDIGREM
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Known secondary structure (DSSP) T


S
T

SS

GGG

TT
BS

SS
B

 .........430.........440.........450.........460.........470.........480.........490
Sequence YIVKRGRLQVVDDDGKKVFVTLQEGSVFGELSILNIAGSKNGNRRTANVRSVGYTDLFVLSKTDLWNALR
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Known secondary structure (DSSP) S
SSSSSS


TT
STT

SSS

SB
SSSS
T
 .........500.........510
Sequence EYPDARKLLLAKGREILKKD
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Known secondary structure (DSSP) T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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