PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5h1aC_

Fold library id	PDB Header	Molecule	Title
c5h1aC_	2.10	PDB header: transcription regulator	Chain: C: PDB Molecule: iclr transcription factor homolog;

Links to external resources
Added to library: Thu Feb 9 16:59:18 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D S M L A R V V R V L E T F N V D R T A Q T A S D I G R R A A L P S S T A H R V V D E M V L V G I L E R G I D G K V R L G M R L W E L A L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
B T T B
B
T
T T S
T T S S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G S M A L R L R Q V A L P H M E R V Q Q R V R E H T Q L A V L E H N E V L F L E R L S H H E A V S N L A R V A G R L P V H A S S S G L M L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T T
T T
S S
S
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A H A G P E V R E E V L S K P L P R V G P G T V T D P E A L R R L L A N A Y R A G Y V A A P G Y I E A V A T G I A V P I R S E G V V I A A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
S T T
S
S S S
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 .

Sequence S A V Q P L Q N A V E P T V E I L R E A A V G I E T D L R A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	S	M	L	A	R	V	V	R	V	L	E	T	F	N	V	D	R	T	A	Q	T	A	S	D	I	G	R	R	A	A	L	P	S	S	T	A	H	R	V	V	D	E	M	V	L	V	G	I	L	E	R	G	I	D	G	K	V	R	L	G	M	R	L	W	E	L	A	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T		B	T	T	B			B										T																T	T	S					T	T	S	S													T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	S	M	A	L	R	L	R	Q	V	A	L	P	H	M	E	R	V	Q	Q	R	V	R	E	H	T	Q	L	A	V	L	E	H	N	E	V	L	F	L	E	R	L	S	H	H	E	A	V	S	N	L	A	R	V	A	G	R	L	P	V	H	A	S	S	S	G	L	M	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																							S									T	T											T	T		S	S							S				G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	H	A	G	P	E	V	R	E	E	V	L	S	K	P	L	P	R	V	G	P	G	T	V	T	D	P	E	A	L	R	R	L	L	A	N	A	Y	R	A	G	Y	V	A	A	P	G	Y	I	E	A	V	A	T	G	I	A	V	P	I	R	S	E	G	V	V	I	A	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S											S						S	T	T																			S							S	S	S		S											T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Sequence	S	A	V	Q	P	L	Q	N	A	V	E	P	T	V	E	I	L	R	E	A	A	V	G	I	E	T	D	L	R	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S		S