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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5h11A_

Fold library idPDB HeaderMoleculeTitle
c5h11A_2.73PDB header: exocytosisChain: A: PDB Molecule: uncharacterized protein;


Added to library: Thu Feb 9 19:56:13 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPLGSQLIQEFTAAQRRGEIGRMREVAAVLLHFKGYAHCVDVYIKQCQEGAYMRNDVFEDIAILCQRVNK
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Known secondary structure (DSSP)



GGGSS

STTSTTTT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QVGEVFCSPETVMAKLIQSIFENKIQAHVKERLDETRNSDVEQYLKNLYDLYTRTTALAAKLTDYNLGSD
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Known secondary structure (DSSP)
S
TTT
TTS


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KHTFLSKLIKNIFSCYLESYIDMERQYLQNRSGMILQRYYDSKNHQKRIDTHGETLLSQEVVVNLLQETR
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Known secondary structure (DSSP) TTTTTTTTSTTT






S





 .........220.........230.........240.........250.........260.........270.........280
Sequence HAFERCNKLSDPADLPKNAFSIFLILVEYLCVDHIDYALEIGLSAIPSADAKNANLYFLDVVQQANTIFH
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Known secondary structure (DSSP) S
TTT




S



S
SS


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence LFDKQFNDHLMPLISSSPKLTECLHKKKEVIEQMEVKLDTGIDRTLNCMIGQMKYILTTEQKKTDFKPED
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Known secondary structure (DSSP) TTTT
TT

GGGTS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence ENNVMIQYTTACSKVCAYVGKQVERVRRSMDGKNVDTVLTELGVRFHRLIHEHLQQFSYSSMGGMLAICD
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Known secondary structure (DSSP) SSS





TTS
GGGS
B
 .........430.........440.........450.........460.........470.........480.........490
Sequence VAEYRRSAKDFRVPLVLQLFDTLHALCNLLVVAPDNLKQVCSGEQLTNLDRNLLHAFVQLRVDYRSARLG
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Known secondary structure (DSSP) TTT
GGGGTS
GGGTTSTS
TTBTTTTTTTTT
 ....
Sequence RHFS
Predicted secondary structure

SS confidence



Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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