PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5gztB_

Fold library id	PDB Header	Molecule	Title
c5gztB_	2.10	PDB header: hydrolase	Chain: B: PDB Molecule: chitinase;

Links to external resources
Added to library: Thu Feb 9 17:08:22 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S V H M N D S V I G V V Y V D K K D T P V R I V A K G S A K V G E V I I A G S V K L E E T D L T G T G F E K V V L K D L L P A N A K V T L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T
B
S S
S
B
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G S F T D V D V A A S A N P Q L N V N S G T I E R L T V A A S S K D A V I V L A S G V K V T T L T L N I K T Q I K G Q G S V G T A V V N L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T
T T
S S
S S
G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G K G S S F E S A P G K T E G I A K D S V T T G G S F G G G G Y G G G S G S S S N P V V K L I S T A S N N D R Q L V L K F N A Y G W D N N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G T T
S S
S S T T G G G
S S S S
T T
S
T T
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence T I V L T S P A G K Q T T Y T Y E K N S A Q F A V S A P E V T F T S D K G L A A G T W L Y S V K T A K G S V T S D T V T G K A F V Q G K I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G
S S
S
S T T
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence S Y I P A W V D W A K D E R G V D A T K F T H L Y Y A F G R I N N G K V V T I K E D A K W T E D P T I T E A D R I K R R N N P D E S N L A Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T T
S S
G G G
S T T G G G
T
T T S
T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence L T G L K A K N P N L K V L V S I G G W E A E G F S D A A L T P E S R E V F A N S A L D F M N K Y N L D G I D L D W E Y P V Y G A W G V I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G T
T T
T T
T S S T T
S
S
T T T T S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence S R P E D K A N F T A L L K L L R E K L D A Q S T T T N K Y Y E L A I A A G A S K T Y T D S V E L T K I T P Y L D Y I N L M T Y D L H G G W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T S
G G G
S
S S
T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence D P A T S H H T A V Y S A T N N Q L S V D S T V K L Y L N N G V P A E K L M V G G A F Y S R V W Q N V E N K G T G L S E K A G S Q A G S P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S B
S S
S S
S T T
T T
G G G S
S B
S S T T S T T
B B
T T
S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence T I V Y S E L V N N Y I N K N G Y T R Y W D D T A K A P Y L F N G S T F I S Y E D T A S A A Y K A E Y I K Q N N L A G F M Y W E Y S Q D S D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
T T T T S S S
T T
S
G G G S
T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence S H E L A N T I Y S R L Y A K S G T P L S V G T S V Y A G T V T M A T Y T Q L P A G T F I L P L T Q G T L K P V I S A S D V T V S G I P A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T
T T
B
S B
S S S S
S
B
S S
G G G
T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence I T Y T V A N A A D H R N A V A V Y V N G G T V A S N V Y D P I D V R V V V K A S A V L E A N M T D S A P A S V T I M P K F G P I L L G Y V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
S S
S
G G G B S S S S
B
T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence P G W V D W T N S A Y K V D A T K L T H I N Y A F A R I K D N K V V K I S E D I N W V N E F P S E E I R E Q R R N N P D D A N F A Y L K T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
G G G
S S
T T T
S T T G G G
T S S
T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence K Q Q N P S L K V L V S I G G W A A E G F S D A A L T P E T R E E L A N S A I A F M H Q Y G F D G I D L D W E Y P V Y G A F G V I K S R P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
T T
T S S T T
S
S
T T T T S
T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence D K Q N F T A L L K L F R E K L D V E G A L H G K Y Y E L A I A S A A A P I Y I N S V E L D K I H Q Y L D Y M S V M T Y D Y H G S W E S K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S
G G G
S
S
T T S S B

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence A H Q A S V Y T S A L S P G D F S A D S V L T A Y R K Q G V P A S K L V I G G A F Y A R G W V N V P N I N H G L F Q Q A G D Q A K N P G T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T S T T
T T
G G G S B
S S
S S G G G T T
B
T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence T Y N D L V K D Y F D K G Y T R Y W D N S A K A P Y L Y N P D A N G G T F I T Y D D E E S L K Y K A E Y A K N Q G L R G V M F W D Y S Q D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B T B T T T B T T T T T T S S S S
T
S
G G G
T

. . . . . . . . . 1130 . . . .

Sequence S G K L L G A I F N E L K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	H	M	N	D	S	V	I	G	V	V	Y	V	D	K	K	D	T	P	V	R	I	V	A	K	G	S	A	K	V	G	E	V	I	I	A	G	S	V	K	L	E	E	T	D	L	T	G	T	G	F	E	K	V	V	L	K	D	L	L	P	A	N	A	K	V	T	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S												S	S									T		B							S	S											S		B								T	T			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	S	F	T	D	V	D	V	A	A	S	A	N	P	Q	L	N	V	N	S	G	T	I	E	R	L	T	V	A	A	S	S	K	D	A	V	I	V	L	A	S	G	V	K	V	T	T	L	T	L	N	I	K	T	Q	I	K	G	Q	G	S	V	G	T	A	V	V	N	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S																		T	T		T	T							T	T									S	S						S	S										G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	K	G	S	S	F	E	S	A	P	G	K	T	E	G	I	A	K	D	S	V	T	T	G	G	S	F	G	G	G	G	Y	G	G	G	S	G	S	S	S	N	P	V	V	K	L	I	S	T	A	S	N	N	D	R	Q	L	V	L	K	F	N	A	Y	G	W	D	N	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	T				S	S			S				S	T	T	G	G	G				S	S	S	S		T	T		S																					T	T										T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	I	V	L	T	S	P	A	G	K	Q	T	T	Y	T	Y	E	K	N	S	A	Q	F	A	V	S	A	P	E	V	T	F	T	S	D	K	G	L	A	A	G	T	W	L	Y	S	V	K	T	A	K	G	S	V	T	S	D	T	V	T	G	K	A	F	V	Q	G	K	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T												G	G	G					S	S								S				S												T	T													S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	Y	I	P	A	W	V	D	W	A	K	D	E	R	G	V	D	A	T	K	F	T	H	L	Y	Y	A	F	G	R	I	N	N	G	K	V	V	T	I	K	E	D	A	K	W	T	E	D	P	T	I	T	E	A	D	R	I	K	R	R	N	N	P	D	E	S	N	L	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S		T	T	T		S	S				G	G	G		S											T	T					G	G	G						T		T	T	S										T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	T	G	L	K	A	K	N	P	N	L	K	V	L	V	S	I	G	G	W	E	A	E	G	F	S	D	A	A	L	T	P	E	S	R	E	V	F	A	N	S	A	L	D	F	M	N	K	Y	N	L	D	G	I	D	L	D	W	E	Y	P	V	Y	G	A	W	G	V	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	G	T		T	T										T	T								T	S	S																		T	T		S							S		T	T	T					T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	R	P	E	D	K	A	N	F	T	A	L	L	K	L	L	R	E	K	L	D	A	Q	S	T	T	T	N	K	Y	Y	E	L	A	I	A	A	G	A	S	K	T	Y	T	D	S	V	E	L	T	K	I	T	P	Y	L	D	Y	I	N	L	M	T	Y	D	L	H	G	G	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																																				S					T	T	S						G	G	G		S									S	S		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	P	A	T	S	H	H	T	A	V	Y	S	A	T	N	N	Q	L	S	V	D	S	T	V	K	L	Y	L	N	N	G	V	P	A	E	K	L	M	V	G	G	A	F	Y	S	R	V	W	Q	N	V	E	N	K	G	T	G	L	S	E	K	A	G	S	Q	A	G	S	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	B				S	S		S	S			S	T	T														T	T			G	G	G							S							S	B		S	S	T	T	S	T	T		B	B				T	T			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	I	V	Y	S	E	L	V	N	N	Y	I	N	K	N	G	Y	T	R	Y	W	D	D	T	A	K	A	P	Y	L	F	N	G	S	T	F	I	S	Y	E	D	T	A	S	A	A	Y	K	A	E	Y	I	K	Q	N	N	L	A	G	F	M	Y	W	E	Y	S	Q	D	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T		T	T							T	T	T	T						S	S	S																					T	T		S							G	G	G	S		T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	H	E	L	A	N	T	I	Y	S	R	L	Y	A	K	S	G	T	P	L	S	V	G	T	S	V	Y	A	G	T	V	T	M	A	T	Y	T	Q	L	P	A	G	T	F	I	L	P	L	T	Q	G	T	L	K	P	V	I	S	A	S	D	V	T	V	S	G	I	P	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												T			T	T				B						S	B						S	S	S	S														S		B		S	S			G	G	G								T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	T	Y	T	V	A	N	A	A	D	H	R	N	A	V	A	V	Y	V	N	G	G	T	V	A	S	N	V	Y	D	P	I	D	V	R	V	V	V	K	A	S	A	V	L	E	A	N	M	T	D	S	A	P	A	S	V	T	I	M	P	K	F	G	P	I	L	L	G	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		S	S												S	S				S										G	G	G	B	S	S	S	S		B												T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	P	G	W	V	D	W	T	N	S	A	Y	K	V	D	A	T	K	L	T	H	I	N	Y	A	F	A	R	I	K	D	N	K	V	V	K	I	S	E	D	I	N	W	V	N	E	F	P	S	E	E	I	R	E	Q	R	R	N	N	P	D	D	A	N	F	A	Y	L	K	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S		G	G	G		S	S				T	T	T		S											T	T					G	G	G						T	S	S											T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	K	Q	Q	N	P	S	L	K	V	L	V	S	I	G	G	W	A	A	E	G	F	S	D	A	A	L	T	P	E	T	R	E	E	L	A	N	S	A	I	A	F	M	H	Q	Y	G	F	D	G	I	D	L	D	W	E	Y	P	V	Y	G	A	F	G	V	I	K	S	R	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T										T	T								T	S	S																		T	T		S							S		T	T	T					T	S				T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	D	K	Q	N	F	T	A	L	L	K	L	F	R	E	K	L	D	V	E	G	A	L	H	G	K	Y	Y	E	L	A	I	A	S	A	A	A	P	I	Y	I	N	S	V	E	L	D	K	I	H	Q	Y	L	D	Y	M	S	V	M	T	Y	D	Y	H	G	S	W	E	S	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	S											S							S						G	G	G		S										S		T	T	S	S	B
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	A	H	Q	A	S	V	Y	T	S	A	L	S	P	G	D	F	S	A	D	S	V	L	T	A	Y	R	K	Q	G	V	P	A	S	K	L	V	I	G	G	A	F	Y	A	R	G	W	V	N	V	P	N	I	N	H	G	L	F	Q	Q	A	G	D	Q	A	K	N	P	G	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S	S			T	T	S	T	T														T	T			G	G	G							S	B					S	S			S	S	G	G	G	T	T		B					T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	T	Y	N	D	L	V	K	D	Y	F	D	K	G	Y	T	R	Y	W	D	N	S	A	K	A	P	Y	L	Y	N	P	D	A	N	G	G	T	F	I	T	Y	D	D	E	E	S	L	K	Y	K	A	E	Y	A	K	N	Q	G	L	R	G	V	M	F	W	D	Y	S	Q	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B								T	B	T	T	T	B						T	T	T	T							T	T	S	S	S	S																						T		S							G	G	G		T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.
Sequence	S	G	K	L	L	G	A	I	F	N	E	L	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S