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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5gzsA_

Fold library idPDB HeaderMoleculeTitle
c5gzsA_2.60PDB header: signaling proteinChain: A: PDB Molecule: ggdef family protein;


Added to library: Sat Aug 19 08:53:25 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STTYKVATEADDVVTRVLFDSIAHHFNLEIEYVNYPSFNDILVAIETGNADFAANITYTDLRAQRFDFSR
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Known secondary structure (DSSP)



SS
T


SSTS
SB


TTGGGTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PTNIEYTYLYSYGGLRLPELRLVGIPKGTTYGTLLKEHYPYIQQVEYEGHLEALTLLESGRVDGVVDAIN
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Known secondary structure (DSSP)


TT


GGG
STTST
TTS
TTSS
S
GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence QLKPXLLKGLDVQLLNDQLPIQPVSIVTPKGKHSALLGKIEKYAHSAHVQRLLRESIQKYQLDIRKQALR
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Known secondary structure (DSSP) GTT

TTTS



STTSSTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSVVESGLNVQRVLRVKLENNPQYALRGISADVVFQACEXLLLKCELVSNGQETWESXFDDLQDKSIDIL
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Known secondary structure (DSSP) T

TTS


SSSS



TT




S

TTS
TTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence APITVSQQRKNLAYFSESYYHPQAILVKREHYKDDVYSNVSELVAERIGVIKDDFFEELLQQXLPNKILF
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Known secondary structure (DSSP)


SSSTTTS



B

TTSSTTS
SSGGGGTTS
TT
STT


 .........360.........370.........380.........390.........400.........410.........420
Sequence SYASQEEKVQALLNKEVDYIVLNRANFNLLLREPIVEDTXIGSFYQYDIAIGFAKNPLGATLAPLFSRAI
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Known secondary structure (DSSP) S
TTS
S


TTT




B
SS
 .........430...
Sequence KXLNTEQIIHTYR
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Known secondary structure (DSSP) TS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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