PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5gykA_

Fold library id	PDB Header	Molecule	Title
c5gykA_	3.60	PDB header: lipid transport	Chain: A: PDB Molecule: mitochondrial distribution and morphology protein 12;

Links to external resources
Added to library: Thu Feb 9 16:38:05 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G M S F D I N W S T L E S D N R L N D L I R K H L N S Y L Q N T Q L P S Y V S N L R V L D F D L G K V G P A I T L K E I T D P L D E F Y D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T S
S S
S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I R E E S P N D I Q F L L E V E Y K G D L L V T I G A D L V L N Y P V E K F M T L P V K L S I S D I G L H S L C I V A C L S K Q L F L S F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
S S S S S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C D V S D P A L D D N Q T V L D P K G P I L A A T K P L E R I S I V R S M K I E T E I G E Q Y Q G Q G S V L R S V G E L E Q F L F T I F K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G G G G
T T
S S S
T T S S
S
G G G S S

. . . . . . . . . 220 . . . . . . .

Sequence F L R K E L A W P S W I N L D F N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	M	S	F	D	I	N	W	S	T	L	E	S	D	N	R	L	N	D	L	I	R	K	H	L	N	S	Y	L	Q	N	T	Q	L	P	S	Y	V	S	N	L	R	V	L	D	F	D	L	G	K	V	G	P	A	I	T	L	K	E	I	T	D	P	L	D	E	F	Y	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S	S																		T	T	S				S	S													S																				T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	R	E	E	S	P	N	D	I	Q	F	L	L	E	V	E	Y	K	G	D	L	L	V	T	I	G	A	D	L	V	L	N	Y	P	V	E	K	F	M	T	L	P	V	K	L	S	I	S	D	I	G	L	H	S	L	C	I	V	A	C	L	S	K	Q	L	F	L	S	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T				S																										S	S	S	S	S																									S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	D	V	S	D	P	A	L	D	D	N	Q	T	V	L	D	P	K	G	P	I	L	A	A	T	K	P	L	E	R	I	S	I	V	R	S	M	K	I	E	T	E	I	G	E	Q	Y	Q	G	Q	G	S	V	L	R	S	V	G	E	L	E	Q	F	L	F	T	I	F	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		G	G	G	G	G	G			T	T		S	S	S								T	T	S	S			S												G	G	G	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Sequence	F	L	R	K	E	L	A	W	P	S	W	I	N	L	D	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B	T	T