Fold library entry viewer: c5gsmB_

Added to library: Thu Feb 9 19:33:55 2017
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	G	K	V	E	F	S	G	K	R	Y	V	I	D	G	E	P	V	T	I	A	G	G	T	L	Q	F	F	R	V	P	A	D	A	W	K	D	R	L	L	K	M	R	E	A	G	L	N	T	V	D	T	Y	V	A	W	N	W	H	E	P	E	K	G	S	F	D	F	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T					T	T												G	G	G	S		G	G	G											T	T															S	B	T	T	B			S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	T	H	P	Q	R	N	L	V	G	F	L	E	L	A	D	E	L	G	F	Y	V	I	I	R	P	G	P	Y	I	C	G	E	W	R	N	G	G	I	P	D	W	L	I	D	E	H	P	E	I	L	A	K	G	P	N	G	P	L	P	R	D	I	Y	Y	P	P	I	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		G	G	G												T	T									S				T	T	B	G	G	G	G										G	G	G	B		B		S	S	S	B			S	S	S	S	S			B		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	H	P	T	Y	L	E	A	V	G	E	W	Y	N	A	V	F	P	V	I	R	K	Y	L	Y	T	N	G	G	P	I	I	S	V	S	I	D	D	E	P	S	Y	W	E	T	I	F	Q	P	F	L	T	D	Y	N	E	I	I	T	K	P	G	G	L	W	E	K	W	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																						T	B	G	G	G	T	S	S							S	S	S		S	T	T	T	T	T	T	S	T	T	T	S								S	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	N	Y	T	L	E	D	L	R	R	R	Y	K	G	D	F	K	D	Y	S	E	I	K	V	P	T	S	F	S	E	P	L	P	K	L	I	D	W	H	H	F	K	L	W	M	I	N	E	Y	V	R	W	I	Y	E	R	M	A	R	E	F	D	V	P	I	S	I	L	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T				S	S	G	G	G	S					S	S	S	S																																	S						S	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	L	L	Q	V	A	W	R	H	F	F	T	Y	M	R	E	H	N	L	K	I	H	V	W	T	E	F	W	Y	S	F	Y	R	S	S	D	F	K	E	D	K	L	G	H	I	Y	Y	K	T	G	I	Y	R	Y	H	V	R	K	A	G	T	P	P	L	S	I	E	T	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		S	T	T												T														S	S					S	G	G	G																			T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	L	A	H	T	I	D	P	T	E	A	E	L	L	Y	S	I	L	P	P	L	G	I	P	N	I	N	Y	Y	L	F	V	G	G	E	N	P	E	G	Y	E	S	H	N	G	I	T	W	D	V	Y	S	P	V	G	L	D	G	S	E	R	P	H	F	G	V	I	K	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S													T	T	T	T	T								T		B						T	T		B		T	T	T	T				S	S		S	B		T	T	S		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	E	T	M	T	S	A	E	G	L	A	D	A	E	L	R	P	K	V	A	V	G	L	Y	E	P	Y	E	A	L	N	L	W	G	Y	E	G	L	E	E	S	T	D	L	N	E	Y	L	L	G	E	R	G	L	F	T	L	L	A	M	S	N	T	P	F	D	A	V	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	T	T	T	T	T		B				S																T			S	S	S	S								T	T	S	T	T									T	T								T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	D	V	T	L	D	E	L	L	S	Y	D	Q	L	W	V	Y	S	L	D	F	M	S	R	E	V	Q	D	K	L	V	E	F	V	A	R	G	G	N	L	V	I	L	P	M	L	P	R	Y	D	E	N	L	E	P	Y	S	S	L	K	D	F	L	G	V	E	V	E	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								T	S	S								S	B															T	T							S					B		T	T	S		B									T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	A	R	R	N	P	R	L	I	Q	F	L	S	V	S	A	E	G	I	D	R	M	L	V	R	N	T	V	R	G	V	R	G	G	E	P	I	A	F	L	G	E	K	P	V	G	A	F	V	R	K	G	G	G	S	A	V	V	L	G	F	R	L	Q	Y	Y	T	S	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	S								T	T								S							S	S							T	T										T	T							S	S							S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	L	H	R	K	F	V	W	K	L	K	E	L	Q	G	V	R	E	D	F	E	V	T	N	P	D	M	I	V	L	P	M	E	G	K	G	Y	A	Y	L	A	V	T	N	P	R	G	H	P	I	K	G	R	I	S	Y	R	G	L	E	V	P	V	L	L	D	G	I	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T				S				S	S	T	T	S								S	S									S	S		S									T	T					S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	R	R	G	T	L	Y	L	P	F	G	V	R	K	G	D	V	E	V	A	Y	A	T	A	T	L	V	M	W	E	G	D	V	L	T	F	R	N	H	L	S	G	H	S	E	I	A	L	K	G	V	E	S	V	K	V	S	G	G	K	I	V	D	G	S	D	G	E	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S								S				T	T							S	S							T	T								S		S								S		S						S	S								S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Sequence	R	I	V	I	E	H	P	G	E	Y	F	E	V	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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