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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5gslB_

Fold library idPDB HeaderMoleculeTitle
c5gslB_2.60PDB header: hydrolaseChain: B: PDB Molecule: 778aa long hypothetical beta-galactosidase;


Added to library: Thu Feb 9 18:24:13 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKVQHDGRLYSLDDERIVVYGGTLQYFRVPRNYWEDRLRKMKSHGLNTVETYIAWNWHEPQEGVFDFTGE
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Known secondary structure (DSSP)


SS
TT



GGGS
GGGTT




SBTTB

SS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence THPQRDLIGFLELAQKLGLYVIIRPGPYICGEWKNGGIPDWLINSHPEILAKSPNGSFPRDVYYPPITYL
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Known secondary structure (DSSP) SSGGG
TT
S


TTBGGGG


GGGB
TT

TTSSS

B
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence HPTYLEYAMKWYEEVLPIIRDYLYSNGGSIISVTIDDEPSYWETIFQPFLTDYNEIIVRENGIWHSWLKE
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Known secondary structure (DSSP)
BGGGTSSSSS
STTTTTTSTTSS


TTTTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NYSLGDLEERYGERFSDYTEIAPPKSFSEPLPKVLDWHHFKIWMINEYVRRLYEKIREYVDVPISLLDPY
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Known secondary structure (DSSP)

SSSSTTTTTS

SSSTT




STTS


S

GG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLLAAWKEFYLYVTRHKLDIHLWTEFWYSFYRTFDFKEDKLGHLYFKTGIYRYYVSKLKTPPLSIETQAS
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Known secondary structure (DSSP) G
STTTT




SSS



SGGGTT



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LANVIEKDEAELLYALLPALGIHNLNYYLYVGGENPRGYESHNGVTWDVYSPIGLDGRERQHVEPIKWIG
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Known secondary structure (DSSP) SSS


TT

S
B


TT
B
TTTT
SS
SB
TTS
B
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence EFLKSNIDFVDSQFKARVAFGMYEPYEALNLWGYKPESFEESVNLNEYLFGERGLLTLLAMSNVPFDVID
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Known secondary structure (DSSP)
T




S
TT


TT
SS


TTSTT
TT


 .........500.........510.........520.........530.........540.........550.........560
Sequence LEISTLEEMLQYEQIWVYSLDFMSREVQEKLIKYVEEGGNLVILPTLPYLDENMKPCTRLRDFLGVEVER
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Known secondary structure (DSSP) TTT

TT
S

SB

TT
S



B
TTSSB

TT


 .........570.........580.........590.........600.........610.........620.........630
Sequence AKARDNMRLIPYLSVDAEGIDRMVVRNVAREVKGGEAIAWIGDKVVGTIVRKGKGSAVILGFRLQYYSSY
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Known secondary structure (DSSP)




SGGG

SS


S



SSTTTTSSB





S
 .........640.........650.........660.........670.........680.........690.........700
Sequence HDMHRKFVDKILQLQGVKREVEVSNRDIIAIPRIHYLVLVNPRDEEVAGKVKYRGVEFEIKMKGRGVLFI
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Known secondary structure (DSSP) S
TT


SSSTTSTT
SSS
TT
SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence PVDVEINGVKLVYATATPIGGGNRRIKFRNHLSDTSEIAIRDGRIRGVKGGYVLQEKGERVYVIRHERET
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Known secondary structure (DSSP) TTSSTT
TT
SSS



SS
SSSSSS
 .....
Sequence FEIEF
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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