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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5grhB_

Fold library idPDB HeaderMoleculeTitle
c5grhB_2.80PDB header: oxidoreductaseChain: B: PDB Molecule: isocitrate dehydrogenase [nad] subunit gamma,


Added to library: Thu Feb 23 10:12:47 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GRHTVTMIPGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIRNAIMAIRRNRVALKGNIETNH
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Known secondary structure (DSSP)



BTTT





S
S
TS
B



T
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKII
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Known secondary structure (DSSP) TS
TTS

TT



SSS

S

S

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVS
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Known secondary structure (DSSP)
T


TTT
TT
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLAS
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Known secondary structure (DSSP)
GGG
S
S
GGGT
TTT

SS
SS



GGGTTSS



 .........290.........300.........310.........320.........330.....
Sequence CMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDVIRHIRVIN
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Known secondary structure (DSSP) TT

TTS

GGGT





Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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