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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5gnnA_ | 1.60 | PDB header: lipid binding protein | Chain: A: PDB Molecule: lipid binding protein; |
Added to library: Thu Feb 9 19:43:25 2017 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | M | L | Y | G | V | E | I | D | E | Q | Y | L | R | V | M | E | E | Y | K | D | K | E | V | I | T | Q | A | D | M | A | K | V | A | L | Q | R | K | N | V | Y | Q | D | Q | A | E | K | R | Q | A | E | L | K | A | E | Y | G | V | G | V | C | V | L | V | R | V | Y | N | A | T | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | T | T | T | T | S | T | T | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | G | G | G | S | S | S | T | T | T | T | G | G | G | G | G | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | G | P | I | T | A | K | I | E | E | S | F | R | G | H | F | G | A | H | T | R | E | K | R | I | G | N | G | Q | W | T | V | F | I | H | T | K | S | A | G | A | A | V | G | S | A | G | C | I | V | Y | G | T | T | D | N | L | D | I | F | S | G | W | Q | N | P | W | N | R | S | W |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | ![]() | ![]() | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | T | T | T | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Sequence | D | S | Q | V | L | V | E | V | R | Q | S | G | H | W | W | K | N | G | S | K | D | Y | M | L | H | L | L | D | T | H | N | G | Q | N | S | D | S | S | Y | G | D | V | K | A | H | G | S | T | G | N | E | T | T | A | Y | V | E | Y | V | Y | S | R | ||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | ![]() | ![]() | T | T | S | S | T | T | T | T | T | T | S | S | T | T | S | ![]() | ![]() | T | T | T | ![]() | ![]() | S | S | S | B | B |
Download: | PDB structure | FASTA sequence |
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