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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5gnnA_

Fold library idPDB HeaderMoleculeTitle
c5gnnA_1.60PDB header: lipid binding proteinChain: A: PDB Molecule: lipid binding protein;


Added to library: Thu Feb 9 19:43:25 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLYGVEIDEQYLRVMEEYKDKEVITQADMAKVALQRKNVYQDQAEKRQAELKAEYGVGVCVLVRVYNATG
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Known secondary structure (DSSP)




SS
SS

TTTTS
TTSSSTTTTSSS


GGG
SSSTTTTGGGGGS

TT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GPITAKIEESFRGHFGAHTREKRIGNGQWTVFIHTKSAGAAVGSAGCIVYGTTDNLDIFSGWQNPWNRSW
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Known secondary structure (DSSP) S






SS
SS





S


SS


SSS







SSS





TTTT

 .........150.........160.........170.........180.........190.........200..
Sequence DSQVLVEVRQSGHWWKNGSKDYMLHLLDTHNGQNSDSSYGDVKAHGSTGNETTAYVEYVYSR
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Known secondary structure (DSSP) S






TT


SS




TTTTTTSSTT


STTT






SSSB

B





Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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