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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5gmkt_

Fold library idPDB HeaderMoleculeTitle
c5gmkt_3.40PDB header: rna binding protein/rnaChain: T: PDB Molecule: pre-mrna-splicing factor bud31;


Added to library: Thu Feb 9 12:45:21 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MDGLSFVDKIPDGYKNEIDQLVKKEFANIKADNSVSTLTNALYTEYLKQRNNKKRRTPDFNDDDDTLFLE
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Known secondary structure (DSSP)



TTT






ST







SSS

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence EYRRKYPRIDTSRYIPNESSEVSLLGIVDSYLKHQEIVLDTLLPQTVSNQWRINNDYIRQTCTIVEEMNI
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Known secondary structure (DSSP) STT
 .........150......
Sequence QQRKQINDLEIYRKRL
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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