PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5gjvA_

Fold library id	PDB Header	Molecule	Title
c5gjvA_	3.60	PDB header: membrane protein	Chain: A: PDB Molecule: voltage-dependent l-type calcium channel subunit alpha-1s;

Links to external resources
Added to library: Thu Feb 9 13:04:53 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F C L T L Q N P L R K A C I S I V E W K P F E T I I L L T I F A N C V A L A V Y L P M P E D D N N S L N L G L E K L E Y F F L T V F S I E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T S S T T T S
T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A M K I I A Y G F L F H Q D A Y L R S G W N V L D F I I V F L G V F T A I L V K A L R A F R V L R P L R L V S G V P S L Q V V L N S I F K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G
S T
S T T T G G G G T S T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence M L P L F H I A L L V L F M V I I Y A I I G L E L F K G K M H K T C Y Y I G T D I V A T V E N E K P S P C A R T G S G R P C T I N G S E C R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T T T
B B T T S S
B
T T
S S T T S
S S S B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence G G W P G P N H G I T H F D N F G F S M L T V Y Q C I T M E G W T D V L Y W V N D A I G N E W P W I Y F V T L I L L G S F F I L N L V L G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S T T S
S
S
S T T T S S T
S S S T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence L S G E F T K E R E K A K S R G T F Q K L R E K Q Q L E E D L R G Y M S W I T Q G E V M W N R V F R W K C H D L V K S R V F Y W L V I L I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T G G G T T
T T T T S S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence A L N T L S I A S E H H N Q P L W L T H L Q D I A N R V L L S L F T I E M L L K M Y G L G L R Q Y F M S I F N R F D C F V V C S G I L E L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T T T
S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence L V E S G A M T P L G I S V L R C I R L L R L F K I T K Y W T S L S N L V A S L L N S I R S I A S L L L L L F L F I I I F A L L G M Q L F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G G G G G G
T T T T T T T T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence G R Y D F E D T E V R R S N F D N F P Q A L I S V F Q V L T G E D W N S V M Y N G I M A Y G G P S Y P G V L V C I Y F I I L F V C G N Y I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S
S
S S T T S
T T S S S S T T T G G G T T T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence L N V F L A I A V D N L A E A E S V R V L C H R I V N A T W F T N F I L L F I L L S S A A L A A E D P I R A E S V R N Q I L G Y F D I A F T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T G G G
T
S
S
S S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence S V F T V E I V L K M T T Y G A F L H K G S F C R N Y F N I L D L L V V A V S L I S M G L V V K I L R V L R V L R P L R A I N R A K G L K H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
G G G G G S
S G G G G T T T
S T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence V V Q C V F V A I R T I G N I V L V T T L L Q F M F A C I G V Q L F K G K F F S C N D L S K M T E E E C R G Y Y Y V Y K D G D P T Q M E L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S S S T T
S S T T S
S
S S
T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence P R Q W I H N D F H F D N V L S A M M S L F T V S T F E G W P Q L L Y R A I D S N E E D M G P V Y N N R V E M A I F F I I Y I I L I A F F M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T T T S S S
S T T
S S
G G G G S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence M N I F V G F V I V T F Q E Q G E T E Y K N C E L D K N Q R Q C V Q Y A L K A R P L R C Y I P K N P Y Q Y Q V W Y V V T S S Y F E Y L M F A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S S
S S
S T T
T S T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence L I M L N T I C L G M Q H Y H Q S E E M N H I S D I L N V A F T I I F T L E M I L K L L A F K A R G Y F G D P W N V F D F L I V I G S I I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T T T T T S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence V I L S E I D T F R I S S A F F R L F R V M R L I K L L S R A E G V R T L L W T F I K S F Q A L P Y V A L L I V M L F F I Y A V I G M Q M F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G G T T T G G G G G T T T T
T T T S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence G K I A L V D G T Q I N R N N N F Q T F P Q A V L L L F R C A T G E A W Q E I L L A C S Y G K L C D P E S D Y A P G E E Y T C G T N F A Y Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S S S
T T S
S S S T T S S S S S S
T T S
S S
S
T T S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence Y F I S F Y M L C A F L I I N L F V A V I M D N F D Y L T R D W S I L G P H H L D E F K A I W A E Y D P E A K G R I K H L D V V T L L R R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S S
S S
S
S S T S S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence Q P P L G F G K F C P H R V A C K R L V G M N M P L N S D G T V T F N A T L F A L V R T A L K I K T E G N F E Q A N E E L R A I I K K I W K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
S S
S
S S T T
G G G
T T S
S T T
S

. . . . . . . . . 1270 . . . . . .

Sequence R T S M K L L D Q V I P P I G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	C	L	T	L	Q	N	P	L	R	K	A	C	I	S	I	V	E	W	K	P	F	E	T	I	I	L	L	T	I	F	A	N	C	V	A	L	A	V	Y	L	P	M	P	E	D	D	N	N	S	L	N	L	G	L	E	K	L	E	Y	F	F	L	T	V	F	S	I	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	T	T								T	S	S	T																T	T	S					T	T	S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	M	K	I	I	A	Y	G	F	L	F	H	Q	D	A	Y	L	R	S	G	W	N	V	L	D	F	I	I	V	F	L	G	V	F	T	A	I	L	V	K	A	L	R	A	F	R	V	L	R	P	L	R	L	V	S	G	V	P	S	L	Q	V	V	L	N	S	I	F	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T		G	G	G			S					T																						S	T	T	T	G	G	G	G	T								S	T	T										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	L	P	L	F	H	I	A	L	L	V	L	F	M	V	I	I	Y	A	I	I	G	L	E	L	F	K	G	K	M	H	K	T	C	Y	Y	I	G	T	D	I	V	A	T	V	E	N	E	K	P	S	P	C	A	R	T	G	S	G	R	P	C	T	I	N	G	S	E	C	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T																							T	T	T	T					B	B	T	T	S	S		B				T	T								S	S	T	T	S					S	S	S	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	G	W	P	G	P	N	H	G	I	T	H	F	D	N	F	G	F	S	M	L	T	V	Y	Q	C	I	T	M	E	G	W	T	D	V	L	Y	W	V	N	D	A	I	G	N	E	W	P	W	I	Y	F	V	T	L	I	L	L	G	S	F	F	I	L	N	L	V	L	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S				S	T	T	S		S		S		S								T					T	T	S	S												T		S	S	S	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	S	G	E	F	T	K	E	R	E	K	A	K	S	R	G	T	F	Q	K	L	R	E	K	Q	Q	L	E	E	D	L	R	G	Y	M	S	W	I	T	Q	G	E	V	M	W	N	R	V	F	R	W	K	C	H	D	L	V	K	S	R	V	F	Y	W	L	V	I	L	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T					G	G	G	T	T																																	T	T									T	T	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	L	N	T	L	S	I	A	S	E	H	H	N	Q	P	L	W	L	T	H	L	Q	D	I	A	N	R	V	L	L	S	L	F	T	I	E	M	L	L	K	M	Y	G	L	G	L	R	Q	Y	F	M	S	I	F	N	R	F	D	C	F	V	V	C	S	G	I	L	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T				S	S		T	T																											T	T								S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	V	E	S	G	A	M	T	P	L	G	I	S	V	L	R	C	I	R	L	L	R	L	F	K	I	T	K	Y	W	T	S	L	S	N	L	V	A	S	L	L	N	S	I	R	S	I	A	S	L	L	L	L	L	F	L	F	I	I	I	F	A	L	L	G	M	Q	L	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				G	G	G	G	G	G	G	G	G			T	T													T	T	T	T	T																				T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	R	Y	D	F	E	D	T	E	V	R	R	S	N	F	D	N	F	P	Q	A	L	I	S	V	F	Q	V	L	T	G	E	D	W	N	S	V	M	Y	N	G	I	M	A	Y	G	G	P	S	Y	P	G	V	L	V	C	I	Y	F	I	I	L	F	V	C	G	N	Y	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				T	T			S				S			S	S	T	T											S		T	T													S	S	S	S	T	T	T	G	G	G	T	T												T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	N	V	F	L	A	I	A	V	D	N	L	A	E	A	E	S	V	R	V	L	C	H	R	I	V	N	A	T	W	F	T	N	F	I	L	L	F	I	L	L	S	S	A	A	L	A	A	E	D	P	I	R	A	E	S	V	R	N	Q	I	L	G	Y	F	D	I	A	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									T	T	T	G	G	G											T																					S				S		S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	V	F	T	V	E	I	V	L	K	M	T	T	Y	G	A	F	L	H	K	G	S	F	C	R	N	Y	F	N	I	L	D	L	L	V	V	A	V	S	L	I	S	M	G	L	V	V	K	I	L	R	V	L	R	V	L	R	P	L	R	A	I	N	R	A	K	G	L	K	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S		G	G	G	G	G	S																											S					G	G	G	G	T						T	T		S	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	V	Q	C	V	F	V	A	I	R	T	I	G	N	I	V	L	V	T	T	L	L	Q	F	M	F	A	C	I	G	V	Q	L	F	K	G	K	F	F	S	C	N	D	L	S	K	M	T	E	E	E	C	R	G	Y	Y	Y	V	Y	K	D	G	D	P	T	Q	M	E	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																		S	S	S		S				S	S	T	T			S	S	T	T	S		S							S	S		T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	P	R	Q	W	I	H	N	D	F	H	F	D	N	V	L	S	A	M	M	S	L	F	T	V	S	T	F	E	G	W	P	Q	L	L	Y	R	A	I	D	S	N	E	E	D	M	G	P	V	Y	N	N	R	V	E	M	A	I	F	F	I	I	Y	I	I	L	I	A	F	F	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S				S											T	T	T	T	S	S										S			S	T	T					S	S			G	G	G	G	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	M	N	I	F	V	G	F	V	I	V	T	F	Q	E	Q	G	E	T	E	Y	K	N	C	E	L	D	K	N	Q	R	Q	C	V	Q	Y	A	L	K	A	R	P	L	R	C	Y	I	P	K	N	P	Y	Q	Y	Q	V	W	Y	V	V	T	S	S	Y	F	E	Y	L	M	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T	S	S			S	S		S										T	T																						T	S								T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	L	I	M	L	N	T	I	C	L	G	M	Q	H	Y	H	Q	S	E	E	M	N	H	I	S	D	I	L	N	V	A	F	T	I	I	F	T	L	E	M	I	L	K	L	L	A	F	K	A	R	G	Y	F	G	D	P	W	N	V	F	D	F	L	I	V	I	G	S	I	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S																																T	T	T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	V	I	L	S	E	I	D	T	F	R	I	S	S	A	F	F	R	L	F	R	V	M	R	L	I	K	L	L	S	R	A	E	G	V	R	T	L	L	W	T	F	I	K	S	F	Q	A	L	P	Y	V	A	L	L	I	V	M	L	F	F	I	Y	A	V	I	G	M	Q	M	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T			G	G	G	G	T	T	T					G	G	G	G	G	T	T	T	T															T	T	T																							S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	G	K	I	A	L	V	D	G	T	Q	I	N	R	N	N	N	F	Q	T	F	P	Q	A	V	L	L	L	F	R	C	A	T	G	E	A	W	Q	E	I	L	L	A	C	S	Y	G	K	L	C	D	P	E	S	D	Y	A	P	G	E	E	Y	T	C	G	T	N	F	A	Y	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S					T	T	S	S	S		T	T	S		S	S	S													T	T	S	S								S	S	S	S					T	T	S				S	S			S					T	T	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	Y	F	I	S	F	Y	M	L	C	A	F	L	I	I	N	L	F	V	A	V	I	M	D	N	F	D	Y	L	T	R	D	W	S	I	L	G	P	H	H	L	D	E	F	K	A	I	W	A	E	Y	D	P	E	A	K	G	R	I	K	H	L	D	V	V	T	L	L	R	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T					T			T	T	S	S																		S	S		S				S	S	T							S	S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	Q	P	P	L	G	F	G	K	F	C	P	H	R	V	A	C	K	R	L	V	G	M	N	M	P	L	N	S	D	G	T	V	T	F	N	A	T	L	F	A	L	V	R	T	A	L	K	I	K	T	E	G	N	F	E	Q	A	N	E	E	L	R	A	I	I	K	K	I	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	S			S	S		S		S	S								T	T					G	G	G														T	T	S				S	T	T																		S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.
Sequence	R	T	S	M	K	L	L	D	Q	V	I	P	P	I	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T										T