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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5gjqT_

Fold library idPDB HeaderMoleculeTitle
c5gjqT_4.50PDB header: hydrolaseChain: T: PDB Molecule: 26s proteasome non-atpase regulatory subunit 8;


Added to library: Thu Feb 9 12:56:57 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence QAATGMYEQLKGEWNRKSPNLSKCGEELGRLKLVLLELNFLPKLTKQQLILARDILEIGAQWSILRKDIP
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Known secondary structure (DSSP)
T
SS

S


TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHPVSL
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Known secondary structure (DSSP) SS
SSSS

TTT
S

TT

S
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDY
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Known secondary structure (DSSP) TS
STTTS
T
ST
S
S
 .........220.........230.........240.........250........
Sequence AKKRGWVLGPNNYYSFASQQQKPEDTTIPSTELAKQVIEYARQLEMIV
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Known secondary structure (DSSP) TT

TT









SSSSSSTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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