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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5gjmB_

Fold library idPDB HeaderMoleculeTitle
c5gjmB_2.91PDB header: lyaseChain: B: PDB Molecule: lysine/ornithine decarboxylase;


Added to library: Thu Feb 9 11:47:35 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKNFRLSEKEVKTLAKRIPTPFLVASLDKVEENYQFMRRHLPRAGVFYAMKANPTPEILSLLAGLGSHFD
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Known secondary structure (DSSP)






S
SS

TTTTS


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VASAGEMEILHELGVDGSQMIYANPVKDARGLKAAADYNVRRFTFDDPSEIDKMAKAVPGADVLVRIAVK
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Known secondary structure (DSSP)
STTT

GGG

SS

TT

SSTSTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence FGAPVEEALDLLKAAQDAGLHAMGICFHVGSQSLSTAAYEEALLVARRLFDEAEEMGMHLTDLDIGGGFP
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Known secondary structure (DSSP)
SGGGTT




STT

TTT









 .........220.........230.........240.........250.........260.........270.........280
Sequence VAKGLNVDLAAMMEAINKQIDRLFPDTAVWTEPGRYMCGTAVNLVTSVIGTKTRGEQPWYILDEGIYGCF
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Known secondary structure (DSSP)


SSSS

SSS

SGGG
SSSS
S

TTTGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence SGIMYDHWTYPLHCFGKGNKKPSTFGGPSCDGIDVLYRDFMAPELKIGDKVLVTEMGSYTSVSATRFNGF
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Known secondary structure (DSSP) GT








S


SSS
TT




TT

S
SSSSGGG


GGG
 .........360........
Sequence YLAPTIIFEDQPEYAARL
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Known secondary structure (DSSP)



GGGSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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