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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ggfC_

Fold library idPDB HeaderMoleculeTitle
c5ggfC_2.49PDB header: transferase, sugar binding proteinChain: C: PDB Molecule: protein o-linked-mannose beta-1,2-n-


Added to library: Thu Feb 9 13:53:46 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RVLDVEVYSSRSKVYVAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNM
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Known secondary structure (DSSP)
BSS
TT

SSS


TTT


TTSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VAPGRVLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGGPVFGEKHSKSPALSSWGD
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Known secondary structure (DSSP) S
TT
S


TT

TT
SSSTT

TT
TTS


SSTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence PVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGYGSVCSCKDPTPIEFSPDPLPDNKVLNVPVAV
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Known secondary structure (DSSP)



S



S
TTT



GGGG
SSS


SS





TT


TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence IAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEEPMDVVALFGLRGIQHTPISIKNARVSQHYKASL
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Known secondary structure (DSSP)
S
TSTT

GGGSS

TT





S
 .........290.........300.........310.........320.........330.........340.........350
Sequence TATFNLFPEAKFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGYEHTAEDPALLYRVETM
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Known secondary structure (DSSP) STT
STT
TT
TTS

TT
BTTT


TT
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence PGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDVSRSYHFGIKHKFNTVPGVQLR
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Known secondary structure (DSSP)

SSTTGGG


TT



TSTT
SSBS



B
B


TT


T
 .........430.........440.........450.........460.........470.........480.........490
Sequence NVDSLKKEAYEVEVHRLLSEAEVLDHSKNPCEDSFLPDTEGHTYVAFIRMEKDDDFTTWTQLAKCLHIWD
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Known secondary structure (DSSP) TGGGGSS

TTS
TTSGGGS
S
SS

STT

TTS

 .........500.........510.........520.........530......
Sequence LDVRGNHRGLWRLFRKKNHFLVVGVPASPYSVKKPPSVTPIFLEPP
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Known secondary structure (DSSP) SS

STTTTTSTTGGG

TT


B





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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