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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5gapG_

Fold library idPDB HeaderMoleculeTitle
c5gapG_3.60PDB header: transcriptionChain: G: PDB Molecule: u4/u6 small nuclear ribonucleoprotein prp3;


Added to library: Sat Jan 30 09:07:23 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LLDLSKFKIYYDNNHGYEWWDTAYLDEKGELMEKYDMNGTSPAEEKLAEDIDEVDDDDDDEHPSIRYVAH
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Known secondary structure (DSSP)
T
SS
TTS






SSS
TTGGGGTT

BTTTB
TTTTSS



 .........80.........90.........100.........110.........120.........130.........140
Sequence PLPEKINEAKVSIKAYLTQHERKRLRRNRRKMAREAREIKIKLGLLPKPEPKVKLSNMMSVFENDQNITD
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TS

S






TTTTTT

SSS
TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PTAWEKVVKDQVDLRKRKHLEENERRHEDAIKRRKEAVNMNVEKPTVYHCKVFQFKNLQNPKIRFKLKMN
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Known secondary structure (DSSP)






S



 .........220.........230.........240.........250.........260.........270.........280
Sequence SKELSLKGLCLRIRDDGPGIIIVVGNEKSCKFYENLVMKRIKWNEDFELHTNTGDIKMDMHNNSISKTWE
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Known secondary structure (DSSP) TT
BTTTS

TT

SSS


SS



SS




 .........290.........300.........310........
Sequence GYLQDCKFKGWFMKVCNDQDSLLRTLGQFDSEHFYSPV
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Known secondary structure (DSSP)
SS



SB



BSSGGGT

TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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