Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5gaoE_

Fold library idPDB HeaderMoleculeTitle
c5gaoE_3.60PDB header: transcriptionChain: E: PDB Molecule: snu66;


Added to library: Sat Jan 30 09:08:48 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Predicted secondary structure

SS confidence





































































Known secondary structure (DSSP)


TTS






























SG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) GGSSSSS



TTSSSSTTSS
S



SSSSGGGGTTT



STTGGGGGTTTT






 .........150.........160.........170.........180.........190.........200.........210
Sequence AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)





SGGGS




STTTTS


TS



TTSSTTTTSSSS
S

S

S
STTSSSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAARAAAAAAAAAA
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)

S

S

SSSSTTSS


TT







S
ST

 .........290.........300.........310.........320.........330........
Sequence AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTKEAYKKLSQKFHGTKSNKK
Predicted secondary structure







SS confidence

























































Known secondary structure (DSSP) TT







SS


SSSS





S

TTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D