Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5g5tA_

Fold library idPDB HeaderMoleculeTitle
c5g5tA_2.85PDB header: hydrolase/dnaChain: A: PDB Molecule: argonaute;


Added to library: Sat Feb 11 11:15:50 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSRFVNFYGGMIINKKDKSFVLPYKVDNKVLKPIDIEYIKS
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
TTTSB
GGGS
S




TTTT

SSS
SS

SSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LKLEYVKPEIAEKLVRGYLKSVHKIEPELSRIIKNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRH
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) GGGS
TS
S

TTSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TASITKHLWDFVNRDKALLEEYVGKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKS
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) SS
TTS
GGGTTSTT


TS


 .........220.........230.........240.........250.........260.........270.........280
Sequence TFGEIDYNQPIMYCEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDN
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) S
S

TT

SS
SS
TTSB

GGGS




TTB
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence TPKELEFMKFNNTPLLVKDVNKNPTKIYSTNTLFTWIKIYLPYDVPEIIRNKNLLTYILIDEEIKDELKA
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) S






TTS
S
GGGTT





B
SB

TTTTT
GGGTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IKDKVNKMFRNYNKIANKTELPKFNYANRWKYFSTDDIRGIIKEIKSEFNDEICFALIIGKEYEILKKQL
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TTTT


SS

TTTTTTS


S



 .........430.........440.........450.........460.........470.........480.........490
Sequence FDLKIISQNILWENWRKDDKGYMTNNLLIQIMGKLGIKYFILDSKTPYDYIMGLDTGNHRVGGCTVVYDS
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TTTT
GGGTT
B

SS

S
S


S
T
 .........500.........510.........520.........530.........540.........550.........560
Sequence EGKIRRIQPIETPERLHLPYVIEYLENKANIDMENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISI
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TS






TS



SS
SS


TTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence RKNNKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWLRFNCGNEEGLKINESIMQLLYDLTKMN
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) SS
S

BS
S

STT



TT



SS



ST

 .........640.........650.........660.........670
Sequence YSAYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI
Predicted secondary structure






















SS confidence







































Known secondary structure (DSSP)




SS
TT



TT

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D