Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5g5oC_

Fold library idPDB HeaderMoleculeTitle
c5g5oC_2.00PDB header: viral proteinChain: C: PDB Molecule: lh3 hexon-interlacing capsid protein;


Added to library: Sat Jun 10 08:22:36 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPPGTLLPGQSPDEAFARNSVVFLVPGAEYNWKNVVIRKPVWIYGNGATVKTSGLGPIIHIMGDLDNPMD
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)

TT
TTS

S
TT


S
S


TT


SSS
S

TTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VRIQDLTFIGGDSPDRLVPFSAVLTNQMALWCIDPRITIRGCSFYNFGGAAIYLERSERDRGQVMITDCR
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) S


SS


SS


TTGGG

SS

S


SS
SS





S
 .........150.........160.........170.........180.........190.........200.........210
Sequence FRGCRIGIANGGSVEYGLASQNNFSDCQICFNVVGGNWTRSGNVASNCRCMYLHTQGMWYEGAAGNFNPA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S
S
TT

S
S
S
S
SS

S
S
SSS
S


TT
S
S
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence HGSFTSNTLNHCDYGGNLWPTEFQLPDRVINLAGFYFDNAAARLPNFSGNSQWYGDMKLINFLPDSTFVI
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

S
SSSSSS

S
S
SS


S
TT
B

S
S



SS

 .........290.........300.........310.........320.........330.........340..
Sequence NGGALYGGPGDTGVIAVATALAAKVFVIGCQGNAGQQIVNVPAANIIPEVGTRKDDATQPAA
Predicted secondary structure































SS confidence





























































Known secondary structure (DSSP) S


SSS
S

GGGGGGS

TT
SS
GGGS

S

TT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D