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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5g52C_

Fold library idPDB HeaderMoleculeTitle
c5g52C_3.80PDB header: virusChain: C: PDB Molecule: vp3;


Added to library: Sat Mar 25 08:55:28 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPSYQQSPRHFVPTGMHSLALGTNLVEPLHALRLDAAGTTQHPVGCAPDEDMTVSSIASRYGLIRRVQWK
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Known secondary structure (DSSP)




S











SS

SS







SS
TT





SSS






TTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence KDHAKGSLLLQLDADPFVEQRIEGTNPISLYWFAPVGVVSSMFMQWRGSLEYRFDIIASQFHTGRLIVGY
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Known secondary structure (DSSP) TTS
SS
BS


BSSS



B



SSS

B


SSSSBS







TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VPGLTASLQLQMDYMKLKSSSYVVFDLQESNSFTFEVPYVSYRPWWVRKYGGNYLPSSTDAPSTLFMYVQ
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Known secondary structure (DSSP)


SGGGSS

TTSSS






SSSS


SS
TT
SSS



S
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence VPLIPMEAVSDTIDINVYVRGGSSFEVCVPVQPSLGLNWNTDFILRNDEEYRAKTGYAPYYAGVWHSFNN
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Known secondary structure (DSSP)




TTS
S

TT




B


S


SS






SS

B


TT

S

BTTBGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence SNSLVFRWGSASDQIAQWPTISVPRGELAFLRIKDGKQAAVGTQPWRTMVVWPSGHGYNIGIPTYNAERA
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Known secondary structure (DSSP) GTB
S
SSTT
B
B






TTS
GGGS
BSSSB


SSSSSS
 .........360.........370.........380.........390.......
Sequence RQLAQHLYGGGSLTDEKAKQLFVPANQQGPGKVSNGNPVWEVMRAPL
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Known secondary structure (DSSP) TTT

SSSTTS
BGGG
TT
B

SSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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